RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 UBE2ZQ9H832 354 aaPredicted RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 NDFIP2Q9NV92 336 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 MPP6Q9NZW5 540 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 EPS15L1Q9UBC2 864 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 TBC1D30Q9Y2I9 924 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 A0A1B0GVM2 712 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 TCAF2A6NFQ2 919 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 NCAM2O15394 837 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 DAPK3O43293 454 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 CLDN11O75508 207 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 ITGAVP06756 1048 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 COILP38432 576 aaPredicted RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 SGSHP51688 502 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 NDST2P52849 883 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 VCPP55072 806 aaKnown RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 RPS24P62847 133 aaKnown RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 FCHO2Q0JRZ9 810 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 GALNT2Q10471 571 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 RWDD4Q6NW29 188 aaKnown RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 NPNTQ6UXI9 565 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 BZW1Q7L1Q6 419 aaKnown RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 DEFB123Q8N688 67 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 C1orf54Q8WWF1 131 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 MAGOHBQ96A72 148 aaKnown RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 RUNDC3BQ96NL0 473 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 DDX47Q9H0S4 455 aaKnown RBP17.13■□□□□ 0.33
LINC00963-208ENST00000454968 MARK1Q9P0L2 795 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 DNPEPQ9ULA0 475 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 NEU2Q9Y3R4 380 aa17.13■□□□□ 0.33
LINC00963-208ENST00000454968 COL4A3Q01955 1670 aa17.12■□□□□ 0.33
LINC00963-208ENST00000454968 GRXCR2A6NFK2 248 aa17.12■□□□□ 0.33
LINC00963-208ENST00000454968 BHMG1C9JSJ3 638 aaPredicted RBP17.12■□□□□ 0.33
LINC00963-208ENST00000454968 SLC9A3R1O14745 358 aaPredicted RBP17.12■□□□□ 0.33
LINC00963-208ENST00000454968 PENKP01210 267 aaPredicted RBP17.12■□□□□ 0.33
LINC00963-208ENST00000454968 PTGIRP43119 386 aa17.12■□□□□ 0.33
LINC00963-208ENST00000454968 SMAD4Q13485 552 aaKnown RBP17.12■□□□□ 0.33
LINC00963-208ENST00000454968 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
LINC00963-208ENST00000454968 LRRC49Q8IUZ0 686 aa17.12■□□□□ 0.33
LINC00963-208ENST00000454968 ADGRG2Q8IZP9 1017 aa17.12■□□□□ 0.33
LINC00963-208ENST00000454968 HJURPQ8NCD3 748 aaPredicted RBP17.12■□□□□ 0.33
LINC00963-208ENST00000454968 FATE1Q969F0 183 aa17.12■□□□□ 0.33
LINC00963-208ENST00000454968 HDAC11Q96DB2 347 aa17.12■□□□□ 0.33
LINC00963-208ENST00000454968 BRD8Q9H0E9 1235 aa17.12■□□□□ 0.33
LINC00963-208ENST00000454968 SHROOM3Q8TF72 1996 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 BCLAF3A2AJT9 711 aaKnown RBP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 HACD1B0YJ81 288 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 MBTPS2O43462 519 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 RBP3P10745 1247 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 FOSL2P15408 326 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 VIPR2P41587 438 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 YBEYP58557 167 aaPredicted RBP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 DHX34Q14147 1143 aaKnown RBP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 PRKD1Q15139 912 aaPredicted RBP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 MPPE1Q53F39 396 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 GLE1Q53GS7 698 aaKnown RBP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 FYB2Q5VWT5 728 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 CCDC137Q6PK04 289 aaKnown RBP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 SETD3Q86TU7 594 aaPredicted RBP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 TP53INP2Q8IXH6 220 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 TDRD5Q8NAT2 981 aaKnown RBP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 ATL2Q8NHH9 583 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 BPIFB1Q8TDL5 484 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 OSCP1Q8WVF1 389 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 ELSPBP1Q96BH3 223 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 RTP4Q96DX8 246 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 TSGA13Q96PP4 275 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 QKIQ96PU8 341 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC00963-208ENST00000454968 FAM83CQ9BQN1 747 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 USP29Q9HBJ7 922 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 HEY1Q9Y5J3 304 aa17.11■□□□□ 0.33
LINC00963-208ENST00000454968 HEPACAM2A8MVW5 462 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 ANHXE9PGG2 379 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 MCF2LO15068 1137 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 ZNF189O75820 626 aaPredicted RBP17.1■□□□□ 0.33
LINC00963-208ENST00000454968 MX2P20592 715 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 HOXD9P28356 352 aaPredicted RBP17.1■□□□□ 0.33
LINC00963-208ENST00000454968 EIF3EP60228 445 aaKnown RBP17.1■□□□□ 0.33
LINC00963-208ENST00000454968 PPIDQ08752 370 aaKnown RBP17.1■□□□□ 0.33
LINC00963-208ENST00000454968 PDK1Q15118 436 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 EML3Q32P44 896 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 TANGO2Q6ICL3 276 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 CXorf57Q6NSI4 855 aaKnown RBP17.1■□□□□ 0.33
LINC00963-208ENST00000454968 C1orf228Q6PIY5 440 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 ZNF783Q6ZMS7 281 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 MFSD6LQ8IWD5 586 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 CFAP52Q8N1V2 620 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 HAUS1Q96CS2 278 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 TMA16Q96EY4 203 aaKnown RBP17.1■□□□□ 0.33
LINC00963-208ENST00000454968 KRT12Q99456 494 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 ZFP14Q9HCL3 533 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 FEZ2Q9UHY8 353 aaPredicted RBP17.1■□□□□ 0.33
LINC00963-208ENST00000454968 KIAA1549LQ6ZVL6 1849 aa17.1■□□□□ 0.33
LINC00963-208ENST00000454968 ILVBLA1L0T0 632 aa17.09■□□□□ 0.33
LINC00963-208ENST00000454968 H3BQ06 376 aaPredicted RBP17.09■□□□□ 0.33
LINC00963-208ENST00000454968 TRDMT1O14717 391 aaKnown RBP17.09■□□□□ 0.33
LINC00963-208ENST00000454968 SCAMP3O14828 347 aaKnown RBP17.09■□□□□ 0.33
LINC00963-208ENST00000454968 CTIFO43310 598 aaKnown RBP17.09■□□□□ 0.33
LINC00963-208ENST00000454968 ECI2O75521 394 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms