RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 OXCT1P55809 520 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 TBX4P57082 545 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 LRRC63Q05C16 580 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 CYP4F3Q08477 520 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 ILKQ13418 452 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 CST6Q15828 149 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 CNGA2Q16280 664 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 HNRNPA1L2Q32P51 320 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 COBLL1Q53SF7 1204 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 UBA3Q8TBC4 463 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 NDRG1Q92597 394 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 LRIG1Q96JA1 1093 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 NT5C1BQ96P26 610 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 ELF4Q99607 663 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 GDF3Q9NR23 364 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 AASDHPPTQ9NRN7 309 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 KIAA1468Q9P260 1216 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 ARMCX3Q9UH62 379 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 ADAMTS1Q9UHI8 967 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 HOOK1Q9UJC3 728 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 BTBD3Q9Y2F9 522 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 PLXNA2O75051 1894 aa8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 NYNRINQ9P2P1 1898 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-209ENST00000454952 SHROOM3Q8TF72 1996 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 FAM47DPA6NHR8 397 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 TK2O00142 265 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 TULP2O00295 520 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 ENC1O14682 589 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 PMM2O15305 246 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 RRP8O43159 456 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 SIN3BO75182 1162 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 RFPL3O75679 317 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 RNASEH2AO75792 299 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 ZNF202O95125 648 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 SMC2O95347 1197 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 LDOC1O95751 146 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 APOEP02649 317 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 IGHV4-34P06331 123 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 JUPP14923 745 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 GOT1P17174 413 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 C5AR1P21730 350 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CD38P28907 300 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CD70P32970 193 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 PPP1R2P41236 205 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CSKP41240 450 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 ABCG1P45844 678 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 ACADSBP45954 432 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 GALCP54803 685 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 NUCB2P80303 420 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 SULT2A1Q06520 285 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 OVGP1Q12889 678 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 MTA1Q13330 715 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 STIM1Q13586 685 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC12A1Q13621 1099 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 ELAVL3Q14576 367 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CBWD6Q4V339 395 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 PKDCCQ504Y2 493 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CCDC157Q569K6 752 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 FAM133BQ5BKY9 247 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CBWD3Q5JTY5 395 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CBWD5Q5RIA9 395 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 DMRTA1Q5VZB9 504 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 RFWD3Q6PCD5 774 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 NCEH1Q6PIU2 408 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 TMEM270Q6UE05 265 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 DHRS13Q6UX07 377 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 LRRC69Q6ZNQ3 347 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 SND1Q7KZF4 910 aaKnown RBP eCLIP8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 BEND5Q7L4P6 421 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 DSG4Q86SJ6 1040 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 ZNF366Q8N895 744 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC35F5Q8WV83 523 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 BAP1Q92560 729 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CNDP2Q96KP4 475 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 GSDMAQ96QA5 445 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 UBL7Q96S82 380 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 ERVMER34-1Q9H9K5 563 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 STIM2Q9P246 746 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 TJP2Q9UDY2 1190 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC12A6Q9UHW9 1150 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 CEP83Q9Y592 693 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 PCDHB4Q9Y5E5 795 aa8.31□□□□□ -1.08
NIF3L1-209ENST00000454952 ITIH6Q6UXX5 1313 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 A0A1W2PP55 124 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 M0QYV0 167 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 PSMA7O14818 248 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 MID1O15344 667 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 P4HA2O15460 535 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC7A4O43246 635 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 LUC7L3O95232 432 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC2A3P11169 496 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC6A4P31645 630 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC8A1P32418 973 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 ECT2LQ008S8 904 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 CCDC15Q0P6D6 951 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 PKP1Q13835 747 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 MEA1Q16626 185 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 MS4A13Q5J8X5 152 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 PITRM1Q5JRX3 1037 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms