RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-240	ENST00000454612	PSAT1	Q9Y617	370 aa		11.44	□□□□□ -0.58
DDR1-240	ENST00000454612	C2CD4B	A6NLJ0	364 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612		C9IYK1	514 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	SP100	P23497	879 aa	Predicted RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	TMED10	P49755	219 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	GJA9	P57773	515 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	CDK16	Q00536	496 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	SLC25A11	Q02978	314 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	PDK2	Q15119	407 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	PLEKHG4	Q58EX7	1191 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	EFHC1	Q5JVL4	640 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	DDIAS	Q8IXT1	998 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	ABI1	Q8IZP0	508 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	NUP93	Q8N1F7	819 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	EFHB	Q8N7U6	833 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	KCTD15	Q96SI1	283 aa	Predicted RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	GBA2	Q9HCG7	927 aa	Predicted RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	VANGL2	Q9ULK5	521 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	MDM4	O15151	490 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	TSPAN1	O60635	241 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	MT-CYB	P00156	380 aa	Predicted RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	C15orf39	Q6ZRI6	1047 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	NAT8L	Q8N9F0	302 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	ATP6V1E2	Q96A05	226 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	SENP8	Q96LD8	212 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	FICD	Q9BVA6	458 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	CADM1	Q9BY67	442 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	UBAP1	Q9NZ09	502 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	PGAP2	Q9UHJ9	254 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	AURKC	Q9UQB9	309 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	SMIM28	A0A1B0GU29	152 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	ITM2A	O43736	263 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	FGFR1	P11362	822 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	2e-10	■■■□□ 15.1
DDR1-240	ENST00000454612	NFKB1	P19838	968 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	IGFBP6	P24592	240 aa	Predicted RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	AP2B1	P63010	937 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	PTP4A2	Q12974	167 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	KCTD21	Q4G0X4	260 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	LRRC38	Q5VT99	294 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	TLK2	Q86UE8	772 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	FAM156A	Q8NDB6	213 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	RBM15B	Q8NDT2	890 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	BLOC1S5	Q8TDH9	187 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	WDR60	Q8WVS4	1066 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	LRGUK	Q96M69	825 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	CRYL1	Q9Y2S2	319 aa		11.43	□□□□□ -0.58
DDR1-240	ENST00000454612	MYBPHL	A2RUH7	354 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	GIPC1	O14908	333 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	TMCC1	O94876	653 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	GSTT1	P30711	240 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	ZBTB17	Q13105	803 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	PPP1R15B	Q5SWA1	713 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	CGB2	Q6NT52	195 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	ZBTB46	Q86UZ6	589 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	ATPAF2	Q8N5M1	289 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	CDC26	Q8NHZ8	85 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	DIS3L	Q8TF46	1054 aa	Known RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	RMDN1	Q96DB5	314 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	MROH8	Q9H579	483 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	CYP3A43	Q9HB55	503 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	TAS2R1	Q9NYW7	299 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	ANGPTL2	Q9UKU9	493 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	ITGA11	Q9UKX5	1188 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	TRDMT1	O14717	391 aa	Known RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	NOL3	O60936	208 aa	Known RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	C22orf31	O95567	290 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	ZFX	P17010	805 aa	Predicted RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	SMPD1	P17405	629 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	SPR	P35270	261 aa	Predicted RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	HDAC4	P56524	1084 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	MPP3	Q13368	585 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	CCL14	Q16627	93 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	SLC45A4	Q5BKX6	768 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	OLFML1	Q6UWY5	402 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	CYP2R1	Q6VVX0	501 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	PCDH20	Q8N6Y1	951 aa	Known RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	CXorf38	Q8TB03	319 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	ERLEC1	Q96DZ1	483 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	SEPT5	Q99719	369 aa	Predicted RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	SYT15	Q9BQS2	421 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	TRPV6	Q9H1D0	765 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	CCDC68	Q9H2F9	335 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	FZD8	Q9H461	694 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	DDX18	Q9NVP1	670 aa	Known RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	OR12D3	Q9UGF7	316 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	SLC12A4	Q9UP95	1085 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	TMA7	Q9Y2S6	64 aa	Known RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612		A8MX80	341 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	AMH	P03971	560 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	SMIM10L2A	P0DMW4	78 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	SMIM10L2B	P0DMW5	78 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	IRF1	P10914	325 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	CPB1	P15086	417 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	PTPN1	P18031	435 aa	Known RBP	11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	FGFR3	P22607	806 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	COPA	P53621	1224 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	NOMO2	Q5JPE7	1267 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	LPCAT4	Q643R3	524 aa		11.42	□□□□□ -0.58
DDR1-240	ENST00000454612	RNF43	Q68DV7	783 aa		11.42	□□□□□ -0.58

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