RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 NPY6RQ99463 290 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 PRMT1Q99873 361 aaKnown RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 NAT10Q9H0A0 1025 aaKnown RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 WDCPQ9H6R7 721 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 NLRC4Q9NPP4 1024 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 INTS6Q9UL03 887 aaKnown RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 ERVW-1Q9UQF0 538 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 DCHS1Q96JQ0 3298 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 PI4KAP42356 2102 aa11.02□□□□□ -0.64
DDX39A-203ENST00000454233 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 FAM170AA1A519 330 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 LGALS16A8MUM7 142 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 GOLGA8SH3BPF8 625 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 CDX4O14627 284 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 SYPP08247 313 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 ADRB1P08588 477 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 PDGFRAP16234 1089 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 RPS14P62263 151 aaKnown RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 NOMO3P69849 1222 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 ECT2LQ008S8 904 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 CDR2Q01850 454 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 UBXN1Q04323 297 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 DEUP1Q05D60 604 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 TYRO3Q06418 890 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 SULT2A1Q06520 285 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 SFSWAPQ12872 951 aaKnown RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 ZNF177Q13360 481 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 HNRNPA1L2Q32P51 320 aaKnown RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 SLC25A52Q3SY17 297 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 FBXL22Q6P050 247 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 LRSAM1Q6UWE0 723 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 TRIM72Q6ZMU5 477 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 CIR1Q86X95 450 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 APCDD1Q8J025 514 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 GANCQ8TET4 914 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 CPA5Q8WXQ8 436 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 PGAP3Q96FM1 320 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 GTPBP2Q9BX10 602 aaKnown RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 BTBD1Q9H0C5 482 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 SIK2Q9H0K1 926 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 PCED1AQ9H1Q7 454 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 PIGVQ9NUD9 493 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 VANGL2Q9ULK5 521 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 SCML1Q9UN30 329 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 NCKAP1Q9Y2A7 1128 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 SIK3Q9Y2K2 1263 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 HS3ST4Q9Y661 456 aa11.02□□□□□ -0.65
DDX39A-203ENST00000454233 CNOT1A5YKK6 2376 aaKnown RBP11.02□□□□□ -0.65
DDX39A-203ENST00000454233 NCOR2Q9Y618 2525 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 MUC22E2RYF6 1773 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 EDDM13A0A1B0GTR0 161 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 A0A1B0GTW7 788 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 TARSL2A2RTX5 802 aaKnown RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 METTL12A8MUP2 240 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 ARHGAP33O14559 1287 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 PAGE1O75459 146 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 CLDN11O75508 207 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 KCNK5O95279 499 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 C7P10643 843 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 ZNF18P17022 549 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 MAOBP27338 520 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 CXCR3P49682 368 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 NOVA1P51513 510 aaKnown RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 JAM2P57087 298 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 CENPCQ03188 943 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 ARID5BQ14865 1188 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 C2CD6Q53TS8 623 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 ACBD5Q5T8D3 534 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 DCAF12L1Q5VU92 463 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 LRRC31Q6UY01 552 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 DHX40Q8IX18 779 aaKnown RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 HDDC3Q8N4P3 179 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 AOPEPQ8N6M6 819 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 SLC20A1Q8WUM9 679 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 DNASE2BQ8WZ79 361 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 SNX19Q92543 992 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 IGSF8Q969P0 613 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 NT5C3BQ969T7 300 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 MYO19Q96H55 970 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 RPL10LQ96L21 214 aaKnown RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 MRGPRX3Q96LB0 322 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 TBCBQ99426 244 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 TKTL2Q9H0I9 626 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 MIR1-1HGQ9H1L0 117 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 RSPH9Q9H1X1 276 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 MTG2Q9H4K7 406 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 CAPN10Q9HC96 672 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 ARHGEF38Q9NXL2 777 aa11.01□□□□□ -0.65
DDX39A-203ENST00000454233 NOCTQ9UK39 431 aaKnown RBP11.01□□□□□ -0.65
DDX39A-203ENST00000454233 LRRC10BA6NIK2 292 aa11□□□□□ -0.65
DDX39A-203ENST00000454233 SMTNL1A8MU46 457 aa11□□□□□ -0.65
DDX39A-203ENST00000454233 TTC34A8MYJ7 566 aa11□□□□□ -0.65
DDX39A-203ENST00000454233 EPHB6O15197 1021 aa11□□□□□ -0.65
DDX39A-203ENST00000454233 OPHN1O60890 802 aa11□□□□□ -0.65
DDX39A-203ENST00000454233 SIN3BO75182 1162 aa11□□□□□ -0.65
DDX39A-203ENST00000454233 ADCY5O95622 1261 aa11□□□□□ -0.65
DDX39A-203ENST00000454233 SEMA4FO95754 770 aa11□□□□□ -0.65
DDX39A-203ENST00000454233 CYP1A1P04798 512 aaPredicted RBP11□□□□□ -0.65
DDX39A-203ENST00000454233 TFE3P19532 575 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms