RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SYNPOQ8N3V7 929 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 ST13P5Q8NFI4 369 aaPredicted RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 SLC35G2Q8TBE7 412 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 DDI1Q8WTU0 396 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 FAM3CQ92520 227 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 CD101Q93033 1021 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 WBP2Q969T9 261 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 ARHGEF26Q96DR7 871 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 TMA16Q96EY4 203 aaKnown RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 PRMT1Q99873 361 aaKnown RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 P2RY13Q9BPV8 354 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 C1QTNF1Q9BXJ1 281 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 TSGA10Q9BZW7 698 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 MFSD1Q9H3U5 465 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 HEBP1Q9NRV9 189 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 GTSE1Q9NYZ3 720 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 COX16Q9P0S2 106 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 VCANP13611 3396 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 A0A1B0GVM2 712 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 TCAF2A6NFQ2 919 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 TMEM221A6NGB7 291 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 NEDD8-MDP1E9PL57 170 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 M0R296 226 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 TERTO14746 1132 aaKnown RBP8.99□□□□□ -0.97
COL28A1-205ENST00000453441 MAN1A2O60476 641 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 CLDN11O75508 207 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 GJB6O95452 261 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 PTMAP06454 111 aaKnown RBP8.99□□□□□ -0.97
COL28A1-205ENST00000453441 KRT7P08729 469 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 CCDC175P0C221 793 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 TYRP14679 529 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 TFE3P19532 575 aaPredicted RBP8.99□□□□□ -0.97
COL28A1-205ENST00000453441 L1CAMP32004 1257 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 CLCN5P51795 746 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 OGDHQ02218 1023 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 ZNF252P-AS1Q0IIN9 211 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 SLC12A1Q13621 1099 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 AUHQ13825 339 aaKnown RBP8.99□□□□□ -0.97
COL28A1-205ENST00000453441 FYB2Q5VWT5 728 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 RAP1GAP2Q684P5 730 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 NADSYN1Q6IA69 706 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 GRAMD4Q6IC98 578 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 ZNF662Q6ZS27 426 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 FAM131BQ86XD5 332 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 TMEM25Q86YD3 366 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 ETFBKMTQ8IXQ9 262 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 WFIKKN2Q8TEU8 576 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 TEKT4Q8WW24 435 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 RPRD1AQ96P16 312 aaPredicted RBP8.99□□□□□ -0.97
COL28A1-205ENST00000453441 PNKPQ96T60 521 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 PACSIN1Q9BY11 444 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 DEC1Q9P2X7 70 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 PPARGC1AQ9UBK2 798 aaKnown RBP8.99□□□□□ -0.97
COL28A1-205ENST00000453441 FBXO10Q9UK96 956 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 CA14Q9ULX7 337 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 SLC27A6Q9Y2P4 619 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 HS3ST4Q9Y661 456 aa8.99□□□□□ -0.97
COL28A1-205ENST00000453441 KIAA1549LQ6ZVL6 1849 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 MYOFQ9NZM1 2061 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 IGLV3-10A0A075B6K4 115 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 A0A0A0MRY4 1105 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 FAM170AA1A519 330 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 KRBA1A5PL33 1030 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 OTOL1A6NHN0 477 aaPredicted RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 DRGXA6NNA5 263 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 TTLL8A6PVC2 850 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 NPC1O15118 1278 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 FGF10O15520 208 aaPredicted RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 TIMM44O43615 452 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 TULP3O75386 442 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 LRCH4O75427 683 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 LUC7L3O95232 432 aaKnown RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 APODP05090 189 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 HOXD9P28356 352 aaPredicted RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 MIPP30301 263 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 SLC6A4P31645 630 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 ETFBP38117 255 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 OPRD1P41143 372 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 GRIA2P42262 883 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 TNFRSF4P43489 277 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 RPS9P46781 194 aaKnown RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 DGKGP49619 791 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 CDH4P55283 916 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 VAC14Q08AM6 782 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 DMC1Q14565 340 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 EIF4HQ15056 248 aaKnown RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 HSF5Q4G112 596 aaPredicted RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 TMEM196Q5HYL7 178 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 ERMARDQ5T6L9 678 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 LRRC38Q5VT99 294 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 C11orf63Q6NUN7 778 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 FBXL22Q6P050 247 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 SCYL2Q6P3W7 929 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 ZNF783Q6ZMS7 281 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 TPGS1Q6ZTW0 290 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 POLNQ7Z5Q5 900 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 DNAAF5Q86Y56 855 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 LGI2Q8N0V4 545 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 RNF10Q8N5U6 811 aaKnown RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms