RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 SLC5A9Q2M3M2 681 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 P3H1Q32P28 736 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 MAP9Q49MG5 647 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 STXBP5Q5T5C0 1151 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ACBD5Q5T8D3 534 aaPredicted RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RNASEH2BQ5TBB1 312 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 IZUMO3Q5VZ72 239 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 PPP2R2DQ66LE6 453 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 HIBCHQ6NVY1 386 aaPredicted RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RWDD4Q6NW29 188 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 EMBQ6PCB8 327 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 Q6ZNB5 142 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 PDZD4Q76G19 769 aaPredicted RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RBM23Q86U06 439 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 DENND1CQ8IV53 801 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 CDKL3Q8IVW4 592 aaPredicted RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 FAM217AQ8IXS0 508 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TDHQ8IZJ6 230 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 UMODL1-AS1Q8N2C9 162 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ELMOD1Q8N336 334 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 MREGQ8N565 214 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 LZTR1Q8N653 840 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RTL3Q8N8U3 475 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 MAB21L3Q8N8X9 362 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TSEN2Q8NCE0 465 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 VN1R2Q8NFZ6 395 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 SHKBP1Q8TBC3 707 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 CCHCR1Q8TD31 782 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 GDPD5Q8WTR4 605 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TFB1MQ8WVM0 346 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 HTR3CQ8WXA8 447 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RSAD2Q8WXG1 361 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 CPT1BQ92523 772 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 MRPS31Q92665 395 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 HDAC11Q96DB2 347 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TCEAL4Q96EI5 215 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 P2RY11Q96G91 374 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 SNF8Q96H20 258 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 GDAP1L1Q96MZ0 367 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TSGA13Q96PP4 275 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 LGMNQ99538 433 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 PRKD2Q9BZL6 878 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 FAM129AQ9BZQ8 928 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ZYG11BQ9C0D3 744 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 SLC39A8Q9C0K1 460 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ATXN3LQ9H3M9 355 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 CATSPERBQ9H7T0 1116 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 SLC28A3Q9HAS3 691 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ASAH2Q9NR71 780 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TMEM248Q9NWD8 314 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ZDHHC7Q9NXF8 308 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ASIC3Q9UHC3 531 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 AGO1Q9UL18 857 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TPX2Q9ULW0 747 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 FARP1Q9Y4F1 1045 aaPredicted RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TRIOBPQ9H2D6 2365 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TRAV19A0A0A6YYK7 116 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC195A0A1B0GUA6 201 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 TCRBV7S3A2A0A539 114 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 SOBPA7XYQ1 873 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 PPP1R12AO14974 1030 aaPredicted RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 NCAM2O15394 837 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ATP8B1O43520 1251 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 MAFKO60675 156 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 PPFIA2O75334 1257 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 METTL18O95568 372 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 FGF19O95750 216 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 LATS1O95835 1130 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 IRF1P10914 325 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 MX2P20592 715 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 PTPN3P26045 913 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 SERPINB6P35237 376 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CHKAP35790 457 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 HSPA9P38646 679 aaKnown RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 GARSP41250 739 aaKnown RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 MAGEA6P43360 314 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 NRIP1P48552 1158 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 SLC11A2P49281 568 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 HARS2P49590 506 aaKnown RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 SGSHP51688 502 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 NDST2P52849 883 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 NTHL1P78549 312 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 SMAD3P84022 425 aaKnown RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CAV1Q03135 178 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 GAD2Q05329 585 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ZNF33AQ06730 810 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CBLBQ13191 982 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CASP8Q14790 479 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 TEAD2Q15562 447 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 UAP1Q16222 522 aaPredicted RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ANKRD20A2Q5SQ80 823 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ADGRF1Q5T601 910 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 GPR158Q5T848 1215 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ZNF697Q5TEC3 545 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ANKRD20A1Q5TYW2 823 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ANKRD20A3Q5VUR7 823 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ANKRD22Q5VYY1 191 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 HEATR6Q6AI08 1181 aaKnown RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 RFWD3Q6PCD5 774 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms