RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ARHGAP26Q9UNA1 814 aa4.84□□□□□ -1.63
LINC00393-202ENST00000452852 NUP98P52948 1817 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 KDM3BQ7LBC6 1761 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 J3KTA2 159 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 TOR1BO14657 336 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 KIAA0355O15063 1070 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 CCP110O43303 1012 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 RGS10O43665 173 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 PPP6R2O75170 966 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 NTSR2O95665 410 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 ANXA6P08133 673 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 ARP10275 920 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 CYP2C9P11712 490 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 GATA3P23771 443 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 MST1P26927 711 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 CXCR5P32302 372 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 ANXA11P50995 505 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 NANOS3P60323 173 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 RPS7P62081 194 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 MC2RQ01718 297 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 EFR3AQ14156 821 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 GRM4Q14833 912 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 IQCB1Q15051 598 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 SF3B3Q15393 1217 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 INSCQ1MX18 579 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 TRIM71Q2Q1W2 868 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 PTCHD3Q3KNS1 767 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 SLC9C2Q5TAH2 1124 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 MANEALQ5VSG8 457 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 TBC1D9BQ66K14 1250 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 RINT1Q6NUQ1 792 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 TAPT1Q6NXT6 567 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 KRT73Q86Y46 540 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 CNBD1Q8NA66 436 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 OR6Y1Q8NGX8 325 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 BPIFB1Q8TDL5 484 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 SMCR8Q8TEV9 937 aaPredicted RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 PPP2R3CQ969Q6 453 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 C3orf49Q96BT1 292 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 GRAMD1AQ96CP6 724 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 TRIB1Q96RU8 372 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 SMOQ99835 787 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 BRD8Q9H0E9 1235 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 SLC25A32Q9H2D1 315 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 PNNQ9H307 717 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 ELAC1Q9H777 363 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 PREBQ9HCU5 417 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 OLA1Q9NTK5 396 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 INTS13Q9NVM9 706 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 KCTD5Q9NXV2 234 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 ETAA1Q9NY74 926 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 MRPS17Q9Y2R5 130 aaKnown RBP4.83□□□□□ -1.64
LINC00393-202ENST00000452852 NEU2Q9Y3R4 380 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 CDY1Q9Y6F8 540 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 SLX4Q8IY92 1834 aa4.83□□□□□ -1.64
LINC00393-202ENST00000452852 POLR2AP24928 1970 aaKnown RBP4.82□□□□□ -1.64
LINC00393-202ENST00000452852 CEMIPQ8WUJ3 1361 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 MAPK8IP3Q9UPT6 1336 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 SCN4AP35499 1836 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 A0A1W2PPH5 198 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 GLTPD2A6NH11 291 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 AQP7P3A6NL99 342 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 E7EVH7 732 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 HTATSF1O43719 755 aaKnown RBP4.82□□□□□ -1.64
LINC00393-202ENST00000452852 GLP2RO95838 553 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 NUDT3O95989 172 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 TK1P04183 234 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 RRM1P23921 792 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 PPP2R1AP30153 589 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 CLK3P49761 638 aaKnown RBP4.82□□□□□ -1.64
LINC00393-202ENST00000452852 ZNF134P52741 427 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 CHRNDQ07001 517 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 TCF15Q12870 199 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 KRT32Q14532 448 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 MGAT5BQ3V5L5 792 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 TAF2Q6P1X5 1199 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 TMPRSS9Q7Z410 1059 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 NBPF5PQ86XG9 351 aaPredicted RBP4.82□□□□□ -1.64
LINC00393-202ENST00000452852 ADGRG5Q8IZF4 528 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 CENPIQ92674 756 aaPredicted RBP4.82□□□□□ -1.64
LINC00393-202ENST00000452852 ZUFSPQ96AP4 578 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 MOGAT1Q96PD6 335 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 TWNKQ96RR1 684 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 GPR63Q9BZJ6 419 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 PAIP1Q9H074 479 aaKnown RBP4.82□□□□□ -1.64
LINC00393-202ENST00000452852 VPS16Q9H269 839 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 SMOC2Q9H3U7 446 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 RIOX1Q9H6W3 641 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 JMJD4Q9H9V9 463 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 FSCN3Q9NQT6 498 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 HELLSQ9NRZ9 838 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 TMOD4Q9NZQ9 345 aa4.82□□□□□ -1.64
LINC00393-202ENST00000452852 ANKRD36CQ5JPF3 1778 aa4.81□□□□□ -1.64
LINC00393-202ENST00000452852 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.81□□□□□ -1.64
LINC00393-202ENST00000452852 PNMA6EA0A0J9YXQ4 647 aa4.81□□□□□ -1.64
LINC00393-202ENST00000452852 ZAR1LA6NP61 321 aa4.81□□□□□ -1.64
LINC00393-202ENST00000452852 CCNT2O60583 730 aaKnown RBP4.81□□□□□ -1.64
LINC00393-202ENST00000452852 SRGAP2O75044 1071 aa4.81□□□□□ -1.64
LINC00393-202ENST00000452852 CAMTA2O94983 1202 aa4.81□□□□□ -1.64
LINC00393-202ENST00000452852 HNRNPA1P09651 372 aaKnown RBP eCLIP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms