RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 RNASE9P60153 205 aaKnown RBP13.31□□□□□ -0.28
CHD3-206ENST00000452447 SHC2P98077 582 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 SFSWAPQ12872 951 aaKnown RBP13.31□□□□□ -0.28
CHD3-206ENST00000452447 SLC12A1Q13621 1099 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 LRSAM1Q6UWE0 723 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 SLC26A9Q7LBE3 791 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 DHX40Q8IX18 779 aaKnown RBP13.31□□□□□ -0.28
CHD3-206ENST00000452447 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
CHD3-206ENST00000452447 OR2I1PQ8NGU4 316 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 GANCQ8TET4 914 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 MYO19Q96H55 970 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 PPP1R9BQ96SB3 815 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 RSPH9Q9H1X1 276 aaPredicted RBP13.31□□□□□ -0.28
CHD3-206ENST00000452447 MTG2Q9H4K7 406 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 SGK2Q9HBY8 427 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 RRN3Q9NYV6 651 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 SCML1Q9UN30 329 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 ERVW-1Q9UQF0 538 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 FHOD1Q9Y613 1164 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 TARSL2A2RTX5 802 aaKnown RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 DAB1O75553 588 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 SEMA4FO95754 770 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 C7P10643 843 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 MATKP42679 507 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 CTSOP43234 321 aaPredicted RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 SULT2A1Q06520 285 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 FOXC1Q12948 553 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 GRIK2Q13002 908 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 SLC14A1Q13336 389 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 ARID5BQ14865 1188 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 DPY19L2P1Q6NXN4 242 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 FBXL22Q6P050 247 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 SND1Q7KZF4 910 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHD3-206ENST00000452447 CIR1Q86X95 450 aaPredicted RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 APCDD1Q8J025 514 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 ZNF397Q8NF99 534 aaPredicted RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 ENOX1Q8TC92 643 aaKnown RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 C18orf8Q96DM3 657 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 RPL10LQ96L21 214 aaKnown RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 MRGPRX3Q96LB0 322 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 RPRD1AQ96P16 312 aaPredicted RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 PRMT1Q99873 361 aaKnown RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 STK33Q9BYT3 514 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 C6orf106Q9H6K1 298 aaPredicted RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 DNAAF2Q9NVR5 837 aaKnown RBP13.3□□□□□ -0.28
CHD3-206ENST00000452447 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHD3-206ENST00000452447 STAP1Q9ULZ2 295 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 PAXBP1Q9Y5B6 917 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 FRYQ5TBA9 3013 aa13.3□□□□□ -0.28
CHD3-206ENST00000452447 EDDM13A0A1B0GTR0 161 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 TTC34A8MYJ7 566 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 GOLGA6L22H0YM25 854 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 PDGFRAP16234 1089 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 CDH5P33151 784 aaPredicted RBP13.29□□□□□ -0.28
CHD3-206ENST00000452447 TAF3Q5VWG9 929 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 USP30Q70CQ3 517 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 PIP4P1Q86T03 277 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 ERICH1Q86X53 443 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 MSANTD4Q8NCY6 345 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 NAA15Q9BXJ9 866 aaKnown RBP13.29□□□□□ -0.28
CHD3-206ENST00000452447 VPS16Q9H269 839 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 WDCPQ9H6R7 721 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 FBXL12Q9NXK8 326 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 SLCO3A1Q9UIG8 710 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 VANGL2Q9ULK5 521 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.29□□□□□ -0.28
CHD3-206ENST00000452447 SPEGQ15772 3267 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 ASPMQ8IZT6 3477 aa13.29□□□□□ -0.28
CHD3-206ENST00000452447 FAM47DPA6NHR8 397 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 F8VZ95 297 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 PAGE1O75459 146 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 NUMBP49757 651 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 SULT1E1P49888 294 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 SIM1P81133 766 aaPredicted RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 AUHQ13825 339 aaKnown RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 CST6Q15828 149 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 FKBP15Q5T1M5 1219 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 C9orf64Q5T6V5 341 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 FAM102AQ5T9C2 384 aaPredicted RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 IL27RAQ6UWB1 636 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 MMAAQ8IVH4 418 aaKnown RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 OMDQ99983 421 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 SIK2Q9H0K1 926 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 PABPC3Q9H361 631 aaKnown RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 HS3ST4Q9Y661 456 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 MID1O15344 667 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 RNASEH2AO75792 299 aaKnown RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 FSBPO95073 299 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 LSM8O95777 96 aaKnown RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 CER1O95813 267 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 F9P00740 461 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 CD59P13987 128 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 MZF1P28698 734 aaPredicted RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 RDXP35241 583 aaKnown RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 GABRB2P47870 512 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 STK19P49842 368 aaPredicted RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 AFF3P51826 1226 aaKnown RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 PLK1P53350 603 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms