RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 LAYNQ6UX15 382 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 SLCO6A1Q86UG4 719 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 IRF2BP1Q8IU81 584 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 MMAAQ8IVH4 418 aaKnown RBP28.04■■■□□ 2.08
USP42-204ENST00000451154 ZCCHC14Q8WYQ9 949 aaKnown RBP28.04■■■□□ 2.08
USP42-204ENST00000451154 RPL10LQ96L21 214 aaKnown RBP28.04■■■□□ 2.08
USP42-204ENST00000451154 FAM81BQ96LP2 452 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 SERGEFQ9UGK8 458 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 TMEM131Q92545 1883 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 FREM2Q5SZK8 3169 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 SYNJ2BP-COX16A0A087WUM0 186 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 KCNU1A8MYU2 1149 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 MID1O15344 667 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 SRPRAP08240 638 aaKnown RBP28.03■■■□□ 2.08
USP42-204ENST00000451154 EIF4EBP2Q13542 120 aaPredicted RBP28.03■■■□□ 2.08
USP42-204ENST00000451154 ARID5BQ14865 1188 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 EXOC3L4Q17RC7 722 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 USP30Q70CQ3 517 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 PASD1Q8IV76 773 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 DEFB106AQ8N104 65 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 ATP6V0D2Q8N8Y2 350 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 KDM1BQ8NB78 822 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 ADAMTS14Q8WXS8 1223 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 CPXM1Q96SM3 734 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 NEUROG2Q9H2A3 272 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 OSGEPQ9NPF4 335 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.03■■■□□ 2.08
USP42-204ENST00000451154 COX16Q9P0S2 106 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 APEX2Q9UBZ4 518 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 SLC12A6Q9UHW9 1150 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 SCML1Q9UN30 329 aa28.03■■■□□ 2.08
USP42-204ENST00000451154 A0A1W2PP55 124 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 IGHV4-34P06331 123 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 PON1P27169 355 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 GALCP54803 685 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 CDK17Q00537 523 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 CST6Q15828 149 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 KCNT1Q5JUK3 1230 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 KIAA0895LQ68EN5 471 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 DBX2Q6ZNG2 339 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 GLRX5Q86SX6 157 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 CIR1Q86X95 450 aaPredicted RBP28.02■■■□□ 2.08
USP42-204ENST00000451154 RHBDD1Q8TEB9 315 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 PPP1R13BQ96KQ4 1090 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 FAM129BQ96TA1 746 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 ORAI3Q9BRQ5 295 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 FAM204AQ9H8W3 233 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 PCDHGB2Q9Y5G2 931 aa28.02■■■□□ 2.08
USP42-204ENST00000451154 TARSL2A2RTX5 802 aaKnown RBP28.01■■■□□ 2.07
USP42-204ENST00000451154 SRRM3A6NNA2 597 aaPredicted RBP28.01■■■□□ 2.07
USP42-204ENST00000451154 F5H5T6 163 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 GRAP2O75791 330 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 GRIA4P48058 902 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 UBE2HP62256 183 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 SHC3Q92529 594 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 RNF34Q969K3 372 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 SLC2A13Q96QE2 648 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 PRMT1Q99873 361 aaKnown RBP28.01■■■□□ 2.07
USP42-204ENST00000451154 DDIT4Q9NX09 232 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 AJAP1Q9UKB5 411 aaPredicted RBP28.01■■■□□ 2.07
USP42-204ENST00000451154 APOBEC2Q9Y235 224 aaKnown RBP28.01■■■□□ 2.07
USP42-204ENST00000451154 FAM208BQ5VWN6 2430 aa28.01■■■□□ 2.07
USP42-204ENST00000451154 EDDM13A0A1B0GTR0 161 aa28■■■□□ 2.07
USP42-204ENST00000451154 RNASEH2AO75792 299 aaKnown RBP28■■■□□ 2.07
USP42-204ENST00000451154 PDGFRAP16234 1089 aa28■■■□□ 2.07
USP42-204ENST00000451154 SLC8A1P32418 973 aa28■■■□□ 2.07
USP42-204ENST00000451154 MTIF2P46199 727 aaKnown RBP28■■■□□ 2.07
USP42-204ENST00000451154 STK19P49842 368 aaPredicted RBP28■■■□□ 2.07
USP42-204ENST00000451154 EFHC1Q5JVL4 640 aa28■■■□□ 2.07
USP42-204ENST00000451154 RNF219Q5W0B1 726 aaPredicted RBP28■■■□□ 2.07
USP42-204ENST00000451154 NCEH1Q6PIU2 408 aa28■■■□□ 2.07
USP42-204ENST00000451154 STK40Q8N2I9 435 aa28■■■□□ 2.07
USP42-204ENST00000451154 OMDQ99983 421 aa28■■■□□ 2.07
USP42-204ENST00000451154 BTBD3Q9Y2F9 522 aa28■■■□□ 2.07
USP42-204ENST00000451154 PKD1L2Q7Z442 2459 aa27.99■■■□□ 2.07
USP42-204ENST00000451154 PLXNB3Q9ULL4 1909 aa27.99■■■□□ 2.07
USP42-204ENST00000451154 ABCB4P21439 1286 aa27.99■■■□□ 2.07
USP42-204ENST00000451154 MZF1P28698 734 aaPredicted RBP27.99■■■□□ 2.07
USP42-204ENST00000451154 SFSWAPQ12872 951 aaKnown RBP27.99■■■□□ 2.07
USP42-204ENST00000451154 SUZ12Q15022 739 aaKnown RBP27.99■■■□□ 2.07
USP42-204ENST00000451154 OR6B2Q6IFH4 312 aa27.99■■■□□ 2.07
USP42-204ENST00000451154 ADAT2Q7Z6V5 191 aaKnown RBP27.99■■■□□ 2.07
USP42-204ENST00000451154 CCAR2Q8N163 923 aaKnown RBP27.99■■■□□ 2.07
USP42-204ENST00000451154 PTPRN2Q92932 1015 aa27.99■■■□□ 2.07
USP42-204ENST00000451154 PCDHGC3Q9UN70 934 aa27.99■■■□□ 2.07
USP42-204ENST00000451154 ANKRD11Q6UB99 2663 aaPredicted RBP27.98■■■□□ 2.07
USP42-204ENST00000451154 ITIH6Q6UXX5 1313 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 GOLGA4Q13439 2230 aaKnown RBP27.98■■■□□ 2.07
USP42-204ENST00000451154 GTPBP10A4D1E9 387 aaKnown RBP27.98■■■□□ 2.07
USP42-204ENST00000451154 H0Y8X5 98 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 FLRT2O43155 660 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 GLI1P08151 1106 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 SLC2A3P11169 496 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 CCR1P32246 355 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 PSMD8P48556 350 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 PTK2Q05397 1052 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 FBXL22Q6P050 247 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 FAM183BPQ6ZVS7 135 aa27.98■■■□□ 2.07
USP42-204ENST00000451154 BAHD1Q8TBE0 780 aaPredicted RBP27.98■■■□□ 2.07
USP42-204ENST00000451154 EBF2Q9HAK2 575 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms