RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 ZNF669Q96BR6 464 aaPredicted RBP22.72■■□□□ 1.23
TTC3-210ENST00000450533 GORASP1Q9BQQ3 440 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 ULBP1Q9BZM6 244 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 STX18Q9P2W9 335 aaKnown RBP22.72■■□□□ 1.23
TTC3-210ENST00000450533 YJEFN3A6XGL0 299 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 WARSP23381 471 aaKnown RBP22.72■■□□□ 1.23
TTC3-210ENST00000450533 STXBP5Q5T5C0 1151 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 VWA5B1Q5TIE3 1220 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 BNIPLQ7Z465 357 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 TNS4Q8IZW8 715 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 PANX3Q96QZ0 392 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 AGAP2Q99490 1192 aa22.72■■□□□ 1.23
TTC3-210ENST00000450533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.71■■□□□ 1.23
TTC3-210ENST00000450533 SERPINE1P05121 402 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 PTPN3P26045 913 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 GP5P40197 560 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 MFSD10Q14728 455 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 XKR4Q5GH76 650 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 CAPRIN2Q6IMN6 1127 aaKnown RBP22.71■■□□□ 1.23
TTC3-210ENST00000450533 RIPOR1Q6ZS17 1223 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 LMNTD2Q8IXW0 634 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 SLC25A41Q8N5S1 370 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 ZC3H15Q8WU90 426 aaKnown RBP22.71■■□□□ 1.23
TTC3-210ENST00000450533 KCNK16Q96T55 309 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 SORT1Q99523 831 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 APOL2Q9BQE5 337 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 NAT9Q9BTE0 207 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 SHCBP1LQ9BZQ2 653 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 DNAI2Q9GZS0 605 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 SNX15Q9NRS6 342 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 IGSF9Q9P2J2 1179 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 COPG2Q9UBF2 871 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 SLC7A8Q9UHI5 535 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 TIMM13Q9Y5L4 95 aaPredicted RBP22.71■■□□□ 1.23
TTC3-210ENST00000450533 MEIS3P2A8K0S8 358 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 TM7SF2O76062 418 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 YY1P25490 414 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 AXLP30530 894 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 ADRA1BP35368 520 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 ITGA9Q13797 1035 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 GPRIN1Q7Z2K8 1008 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 PLD6Q8N2A8 252 aaKnown RBP22.71■■□□□ 1.23
TTC3-210ENST00000450533 DCLK2Q8N568 766 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 TOP6BLQ8N6T0 577 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 NPWQ8N729 165 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 DNAAF3Q8N9W5 541 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 CFAP61Q8NHU2 1237 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 SLC2A13Q96QE2 648 aa22.71■■□□□ 1.23
TTC3-210ENST00000450533 PTGESO14684 152 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 TWF2Q6IBS0 349 aaKnown RBP22.7■■□□□ 1.22
TTC3-210ENST00000450533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.7■■□□□ 1.22
TTC3-210ENST00000450533 CAB39LQ9H9S4 337 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 APOBEC2Q9Y235 224 aaKnown RBP22.7■■□□□ 1.22
TTC3-210ENST00000450533 SNX10Q9Y5X0 201 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 LIN7AO14910 233 aaPredicted RBP22.7■■□□□ 1.22
TTC3-210ENST00000450533 GCKP35557 465 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 SLC25A3Q00325 362 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 DPY19L2Q6NUT2 758 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 PLEKHH3Q7Z736 793 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 STRA8Q7Z7C7 330 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 CRTAC1Q9NQ79 661 aa22.7■■□□□ 1.22
TTC3-210ENST00000450533 ZBTB24O43167 697 aaPredicted RBP22.69■■□□□ 1.22
TTC3-210ENST00000450533 ATP9BO43861 1147 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 FAM200BP0CF97 657 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 RALBP11234 206 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 TPI1P60174 286 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 NAB1Q13506 487 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 PCBP1Q15365 356 aaKnown RBP eCLIP22.69■■□□□ 1.22
TTC3-210ENST00000450533 DLG2Q15700 870 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 SPANXN3Q5MJ09 141 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 RABGAP1LQ5R372 815 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 PPP4R1Q8TF05 950 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 OXCT2Q9BYC2 517 aaPredicted RBP22.69■■□□□ 1.22
TTC3-210ENST00000450533 TMEM30AQ9NV96 361 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 DDX43Q9NXZ2 648 aaKnown RBP22.69■■□□□ 1.22
TTC3-210ENST00000450533 VANGL2Q9ULK5 521 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 CORO1CQ9ULV4 474 aaPredicted RBP22.69■■□□□ 1.22
TTC3-210ENST00000450533 SF3B1O75533 1304 aaKnown RBP eCLIP22.69■■□□□ 1.223e-7■■■■■ 46.9
TTC3-210ENST00000450533 CIB2O75838 187 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 USP17L7P0C7H9 530 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 NCAM1P13591 858 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 AOC1P19801 751 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 CACNA2D1P54289 1103 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 TBCCQ15814 346 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 DNAL1Q4LDG9 190 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 CERCAMQ5T4B2 595 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 C1orf146Q5VVC0 180 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 UCMAQ8WVF2 138 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 KCTD13Q8WZ19 329 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 MFSD3Q96ES6 412 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 CPNE1Q99829 537 aa22.69■■□□□ 1.22
TTC3-210ENST00000450533 WDR6Q9NNW5 1121 aaKnown RBP22.69■■□□□ 1.22
TTC3-210ENST00000450533 KIF1CO43896 1103 aaKnown RBP22.68■■□□□ 1.22
TTC3-210ENST00000450533 SIN3BO75182 1162 aa22.68■■□□□ 1.22
TTC3-210ENST00000450533 IDH3AP50213 366 aa22.68■■□□□ 1.22
TTC3-210ENST00000450533 AFF1P51825 1210 aaKnown RBP22.68■■□□□ 1.22
TTC3-210ENST00000450533 BEX3Q00994 111 aa22.68■■□□□ 1.22
TTC3-210ENST00000450533 DBN1Q16643 649 aa22.68■■□□□ 1.22
TTC3-210ENST00000450533 HSP90AA5PQ58FG0 334 aa22.68■■□□□ 1.22
TTC3-210ENST00000450533 CMPK2Q5EBM0 449 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms