RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 RNF219Q5W0B1 726 aaPredicted RBP16.55■□□□□ 0.24
SGCE-208ENST00000450385 RAP1GAP2Q684P5 730 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 ZNF776Q68DI1 518 aaPredicted RBP16.55■□□□□ 0.24
SGCE-208ENST00000450385 IL27RAQ6UWB1 636 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 TRIM72Q6ZMU5 477 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 ARMCX6Q7L4S7 300 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 WFDC5Q8TCV5 224 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 NPY6RQ99463 290 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 GPR174Q9BXC1 333 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 NAT10Q9H0A0 1025 aaKnown RBP16.55■□□□□ 0.24
SGCE-208ENST00000450385 BTBD1Q9H0C5 482 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 SLC6A17Q9H1V8 727 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 WDCPQ9H6R7 721 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 DNAAF2Q9NVR5 837 aaKnown RBP16.55■□□□□ 0.24
SGCE-208ENST00000450385 AJAP1Q9UKB5 411 aaPredicted RBP16.55■□□□□ 0.24
SGCE-208ENST00000450385 INTS6Q9UL03 887 aaKnown RBP16.55■□□□□ 0.24
SGCE-208ENST00000450385 ERVW-1Q9UQF0 538 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 TPRP12270 2363 aaKnown RBP16.54■□□□□ 0.24
SGCE-208ENST00000450385 EDDM13A0A1B0GTR0 161 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 M0QYT0 321 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 OPHN1O60890 802 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 RPS14P62263 151 aaKnown RBP16.54■□□□□ 0.24
SGCE-208ENST00000450385 AUHQ13825 339 aaKnown RBP16.54■□□□□ 0.24
SGCE-208ENST00000450385 HSP90AA4PQ58FG1 418 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 CCDC183Q5T5S1 534 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 LRSAM1Q6UWE0 723 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 CFAP52Q8N1V2 620 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 EPS8L1Q8TE68 723 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 MYO19Q96H55 970 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 VPS16Q9H269 839 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 ARHGEF38Q9NXL2 777 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 LIMA1Q9UHB6 759 aaKnown RBP16.54■□□□□ 0.24
SGCE-208ENST00000450385 PCDH15Q96QU1 1955 aa16.54■□□□□ 0.24
SGCE-208ENST00000450385 DOCK4Q8N1I0 1966 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 ADAMTS9Q9P2N4 1935 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.53■□□□□ 0.24
SGCE-208ENST00000450385 MEI4A8MW99 385 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 CCDC172P0C7W6 258 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 ZNF883P0CG24 379 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 HLA-EP13747 358 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 CDH4P55283 916 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 SEMA3BQ13214 749 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 ZNF177Q13360 481 aaPredicted RBP16.53■□□□□ 0.24
SGCE-208ENST00000450385 FSCBQ5H9T9 825 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 FBXL22Q6P050 247 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 LRRC31Q6UY01 552 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 XYLT1Q86Y38 959 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 CCAR2Q8N163 923 aaKnown RBP16.53■□□□□ 0.24
SGCE-208ENST00000450385 MRGPRX3Q96LB0 322 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 RPRD1AQ96P16 312 aaPredicted RBP16.53■□□□□ 0.24
SGCE-208ENST00000450385 HAPLN3Q96S86 360 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 GANQ9H2C0 597 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 FANCLQ9NW38 375 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 XPO7Q9UIA9 1087 aaKnown RBP16.53■□□□□ 0.24
SGCE-208ENST00000450385 FZD4Q9ULV1 537 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 TBC1D30Q9Y2I9 924 aa16.53■□□□□ 0.24
SGCE-208ENST00000450385 CXorf51AA0A1B0GTR3 108 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 BCAT2O15382 392 aaPredicted RBP16.52■□□□□ 0.24
SGCE-208ENST00000450385 GRAP2O75791 330 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 ADH1BP00325 375 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.24
SGCE-208ENST00000450385 PMLP29590 882 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 RDXP35241 583 aaKnown RBP16.52■□□□□ 0.24
SGCE-208ENST00000450385 SOX5P35711 763 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 STAT1P42224 750 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 NOVA1P51513 510 aaKnown RBP16.52■□□□□ 0.24
SGCE-208ENST00000450385 JAM2P57087 298 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 PITX1P78337 314 aaPredicted RBP16.52■□□□□ 0.24
SGCE-208ENST00000450385 CDR2Q01850 454 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 NME3Q13232 169 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 C9orf64Q5T6V5 341 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 N4BP2L1Q5TBK1 243 aaPredicted RBP16.52■□□□□ 0.24
SGCE-208ENST00000450385 DCAF12L1Q5VU92 463 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 DSG4Q86SJ6 1040 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 SETD3Q86TU7 594 aaPredicted RBP16.52■□□□□ 0.24
SGCE-208ENST00000450385 NOP9Q86U38 636 aaKnown RBP16.52■□□□□ 0.24
SGCE-208ENST00000450385 MYEOVQ96EZ4 313 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 SPAG5Q96R06 1193 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 ERGIC2Q96RQ1 377 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 KDM4CQ9H3R0 1056 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 ADAMTS1Q9UHI8 967 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 ANGPTL2Q9UKU9 493 aa16.52■□□□□ 0.24
SGCE-208ENST00000450385 NUMA1Q14980 2115 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 LGALS16A8MUM7 142 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 PAGE1O75459 146 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 ENDOD1O94919 500 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 SEMA4FO95754 770 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 CYP1A1P04798 512 aaPredicted RBP16.51■□□□□ 0.23
SGCE-208ENST00000450385 AFF3P51826 1226 aaKnown RBP16.51■□□□□ 0.23
SGCE-208ENST00000450385 POLR2FP61218 127 aaKnown RBP16.51■□□□□ 0.23
SGCE-208ENST00000450385 NOMO3P69849 1222 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 KRT83P78385 493 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 DEUP1Q05D60 604 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 ELAVL3Q14576 367 aaKnown RBP16.51■□□□□ 0.23
SGCE-208ENST00000450385 FAM102AQ5T9C2 384 aaPredicted RBP16.51■□□□□ 0.23
SGCE-208ENST00000450385 SH3PXD2AQ5TCZ1 1133 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 PSAPL1Q6NUJ1 521 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 PPP1R2P3Q6NXS1 205 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 ZNF783Q6ZMS7 281 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms