RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ABCB8Q9NUT2 735 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 INTUQ9ULD6 942 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 ATXN2Q99700 1313 aaKnown RBP17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 IGHV1OR15-9A0A0B4J2B8 117 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 ANKRD62A6NC57 917 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 KCNA4P22459 653 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 MMP8P22894 467 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 PRKCHP24723 683 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 YWHAZP63104 245 aaKnown RBP17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 RPL6Q02878 288 aaKnown RBP17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 RING1Q06587 406 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 STARD3Q14849 445 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 FUT11Q495W5 492 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 STPG1Q5TH74 334 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 CHST9Q7L1S5 443 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 KIAA1328Q86T90 577 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 ZDHHC17Q8IUH5 632 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 MCOLN2Q8IZK6 566 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 C17orf53Q8N3J3 647 aaPredicted RBP17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 CYB5D2Q8WUJ1 264 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 CTNNBL1Q8WYA6 563 aaPredicted RBP17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 SLC39A13Q96H72 371 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 POPDC2Q9HBU9 364 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 KCND1Q9NSA2 647 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 TMEM74BQ9NUR3 256 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 XPO7Q9UIA9 1087 aaKnown RBP17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 TLR6Q9Y2C9 796 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 PCDHA13Q9Y5I0 950 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 DNAH14Q0VDD8 3507 aa17.63■□□□□ 0.41
PRPF40A-204ENST00000450303 SYNJ2BP-COX16A0A087WUM0 186 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 KHNYNO15037 678 aaKnown RBP17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 GRAP2O75791 330 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 TUBB4AP04350 444 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 EPHX1P07099 455 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 CCDC175P0C221 793 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 HLA-EP13747 358 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 CD70P32970 193 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 GABRB2P47870 512 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 ZC3H12AQ5D1E8 599 aaKnown RBP17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 RNF43Q68DV7 783 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 OR6B2Q6IFH4 312 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 MMS22LQ6ZRQ5 1243 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 CFAP52Q8N1V2 620 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 ZNF366Q8N895 744 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 AZIN2Q96A70 460 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 PRICKLE1Q96MT3 831 aaPredicted RBP17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 C11orf70Q9BRQ4 267 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 EDEM2Q9BV94 578 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 TAS2R14Q9NYV8 317 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 COX16Q9P0S2 106 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 GGA2Q9UJY4 613 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 NENFQ9UMX5 172 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 SPTBN2O15020 2390 aa17.62■□□□□ 0.41
PRPF40A-204ENST00000450303 TIMM44O43615 452 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 SYNCRIPO60506 623 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 ZNF217O75362 1048 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 TRUB2O95900 331 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 PABPC1P11940 636 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 ITPKAP23677 461 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 PI4KAP42356 2102 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 GALCP54803 685 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 RPS24P62847 133 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 IRX4P78413 519 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 ENPP2Q13822 863 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 EIF4HQ15056 248 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 PTPN20Q4JDL3 420 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 FNDC3BQ53EP0 1204 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 DCAF6Q58WW2 860 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 LYSMD4Q5XG99 296 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 MBLAC2Q68D91 279 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 SERPINA13PQ6UXR4 307 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 SLC36A4Q6YBV0 504 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 FAM183BPQ6ZVS7 135 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 MON1BQ7L1V2 547 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 BEND5Q7L4P6 421 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 ADIPOR2Q86V24 386 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 CACUL1Q86Y37 369 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 DEFB106AQ8N104 65 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 CARNMT1Q8N4J0 409 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 WFIKKN2Q8TEU8 576 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 ZNF653Q96CK0 615 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 MKRN2Q9H000 416 aaKnown RBP17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 PRDM16Q9HAZ2 1276 aa17.61■□□□□ 0.41
PRPF40A-204ENST00000450303 ADAMTS9Q9P2N4 1935 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 CKAP5Q14008 2032 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 LNP1A1A4G5 178 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 C4orf47A7E2U8 309 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 NPC1O15118 1278 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 IRAK2O43187 625 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 ZSCAN12O43309 604 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 APOEP02649 317 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 ERBB2P04626 1255 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 TMEM253P0C7T8 217 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 ABCB4P21439 1286 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 VAV2P52735 878 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 LIMK1P53667 647 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 PPM1JQ5JR12 505 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 RAP1GAP2Q684P5 730 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 KIAA0907Q7Z7F0 614 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms