RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 F8VZ95 297 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 H0Y626 953 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 EPHB6O15197 1021 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 SIN3BO75182 1162 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 SRPRAP08240 638 aaKnown RBP12.76□□□□□ -0.37
MSH5-209ENST00000450148 SLC2A3P11169 496 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 ACADMP11310 421 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 CD59P13987 128 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 MZF1P28698 734 aaPredicted RBP12.76□□□□□ -0.37
MSH5-209ENST00000450148 SCNN1AP37088 669 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 MATKP42679 507 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 PLK1P53350 603 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 CENPCQ03188 943 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 ZBTB16Q05516 673 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 KRT31Q15323 416 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 C9orf64Q5T6V5 341 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 CXorf57Q6NSI4 855 aaKnown RBP12.76□□□□□ -0.37
MSH5-209ENST00000450148 TRNP1Q6NT89 227 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 BNIPLQ7Z465 357 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 C14orf80Q86SX3 495 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 XYLT1Q86Y38 959 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 ZDHHC17Q8IUH5 632 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 ZNF683Q8IZ20 524 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 ZCCHC9Q8N567 271 aaKnown RBP12.76□□□□□ -0.37
MSH5-209ENST00000450148 TMEM35BQ8NCS4 154 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 PGAP3Q96FM1 320 aaPredicted RBP12.76□□□□□ -0.37
MSH5-209ENST00000450148 ORAI3Q9BRQ5 295 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 GTPBP2Q9BX10 602 aaKnown RBP12.76□□□□□ -0.37
MSH5-209ENST00000450148 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 PIGVQ9NUD9 493 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 COX16Q9P0S2 106 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 HS3ST4Q9Y661 456 aa12.76□□□□□ -0.37
MSH5-209ENST00000450148 A0A1B0GVM2 712 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 TCAF2A6NFQ2 919 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 M0QYT0 321 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 PAGE1O75459 146 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 ADCY5O95622 1261 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 SYPP08247 313 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 MMEP08473 750 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 ABCB4P21439 1286 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 GGCXP38435 758 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 CXCR3P49682 368 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 STK19P49842 368 aaPredicted RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 JAM2P57087 298 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 NOMO3P69849 1222 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 ZNF252P-AS1Q0IIN9 211 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 GRIK2Q13002 908 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 NME3Q13232 169 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 SLC12A1Q13621 1099 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 AUHQ13825 339 aaKnown RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 C2CD6Q53TS8 623 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 TAF3Q5VWG9 929 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 ZNF776Q68DI1 518 aaPredicted RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 DHX40Q8IX18 779 aaKnown RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 C18orf8Q96DM3 657 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 RPL10LQ96L21 214 aaKnown RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 FAM129BQ96TA1 746 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 VPS16Q9H269 839 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 HSD3B7Q9H2F3 369 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 PABPC3Q9H361 631 aaKnown RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 FANCLQ9NW38 375 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 ARHGEF38Q9NXL2 777 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.75□□□□□ -0.37
MSH5-209ENST00000450148 SERGEFQ9UGK8 458 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 SLC12A6Q9UHW9 1150 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 EIF2B4Q9UI10 523 aaKnown RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 TMEM59LQ9UK28 342 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 NOCTQ9UK39 431 aaKnown RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 SIK3Q9Y2K2 1263 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.75□□□□□ -0.37
MSH5-209ENST00000450148 CEP83Q9Y592 693 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 OR51B4Q9Y5P0 310 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 CABIN1Q9Y6J0 2220 aa12.75□□□□□ -0.37
MSH5-209ENST00000450148 ACACBO00763 2458 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 FAM170AA1A519 330 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 TARSL2A2RTX5 802 aaKnown RBP12.74□□□□□ -0.37
MSH5-209ENST00000450148 PES1O00541 588 aaKnown RBP12.74□□□□□ -0.37
MSH5-209ENST00000450148 BCAT2O15382 392 aaPredicted RBP12.74□□□□□ -0.37
MSH5-209ENST00000450148 OPHN1O60890 802 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 MOCS3O95396 460 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 SEMA4FO95754 770 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 DNTTP04053 509 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 CYP1A1P04798 512 aaPredicted RBP12.74□□□□□ -0.37
MSH5-209ENST00000450148 GNSP15586 552 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 CHRNB2P17787 502 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 FLT3P36888 993 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 NUMBP49757 651 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 VASPP50552 380 aaPredicted RBP12.74□□□□□ -0.37
MSH5-209ENST00000450148 SNX16P57768 344 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 ST8SIA6P61647 398 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 FAM193AP78312 1265 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 ECT2LQ008S8 904 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 TTC39BQ5VTQ0 682 aaPredicted RBP12.74□□□□□ -0.37
MSH5-209ENST00000450148 USP30Q70CQ3 517 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 APTXQ7Z2E3 356 aaKnown RBP12.74□□□□□ -0.37
MSH5-209ENST00000450148 FRS2Q8WU20 508 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms