RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ARHGAP12Q8IWW6 846 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 ZNF567Q8N184 647 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 MCUQ8NE86 351 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 ATP6V1G3Q96LB4 118 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 TSGA13Q96PP4 275 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 KLHL5Q96PQ7 755 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 VAT1Q99536 393 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 TCF25Q9BQ70 676 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 EMILIN2Q9BXX0 1053 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 ROPN1BQ9BZX4 212 aaPredicted RBP14.64□□□□□ -0.07
USP39-207ENST00000450066 ROPN1Q9HAT0 212 aaPredicted RBP14.64□□□□□ -0.07
USP39-207ENST00000450066 ALG13Q9NP73 1137 aaKnown RBP14.64□□□□□ -0.07
USP39-207ENST00000450066 GOLGA6AQ9NYA3 693 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 MPP6Q9NZW5 540 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 PLXNA4Q9HCM2 1894 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 DRGXA6NNA5 263 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 HMGB1P1B2RPK0 211 aaPredicted RBP14.63□□□□□ -0.07
USP39-207ENST00000450066 KCNK1O00180 336 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 OAS1P00973 400 aaKnown RBP14.63□□□□□ -0.07
USP39-207ENST00000450066 PTPN3P26045 913 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 KCNQ1P51787 676 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 ERVFC1P60507 584 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 FASTKD3Q14CZ7 662 aaKnown RBP14.63□□□□□ -0.07
USP39-207ENST00000450066 PARP6Q2NL67 630 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 MSS51Q4VC12 460 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 PABPC1LQ4VXU2 614 aaKnown RBP14.63□□□□□ -0.07
USP39-207ENST00000450066 RAP1GAP2Q684P5 730 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 FBXL22Q6P050 247 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 CCDC149Q6ZUS6 474 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 TMEM150AQ86TG1 271 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 LRRC49Q8IUZ0 686 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 CCDC13Q8IYE1 715 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 MRPL43Q8N983 215 aaKnown RBP14.63□□□□□ -0.07
USP39-207ENST00000450066 UHMK1Q8TAS1 419 aaKnown RBP14.63□□□□□ -0.07
USP39-207ENST00000450066 DPF3Q92784 378 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 ENTPD7Q9NQZ7 604 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 TMEM248Q9NWD8 314 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 IGSF9Q9P2J2 1179 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 TRHDEQ9UKU6 1024 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 CLUHO75153 1309 aa14.63□□□□□ -0.07
USP39-207ENST00000450066 LINC01553A4QN01 128 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 E7EVH7 732 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 CCNCP24863 283 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 HARS2P49590 506 aaKnown RBP14.62□□□□□ -0.07
USP39-207ENST00000450066 CDK16Q00536 496 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 UMODL1-AS1Q8N2C9 162 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 PYROXD1Q8WU10 500 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 AZIN2Q96A70 460 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 PLD4Q96BZ4 506 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 SERPINB12Q96P63 405 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 CENPHQ9H3R5 247 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 LRRC4CQ9HCJ2 640 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 NDFIP2Q9NV92 336 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 CHD9Q3L8U1 2897 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 CHD7Q9P2D1 2997 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 C2orf78A6NCI8 922 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 C5orf67F2Z3F1 127 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 DFFAO00273 331 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 TCEA3O75764 348 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 F11P03951 625 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 UBE3AQ05086 875 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 SYCP2LQ5T4T6 812 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 C6orf118Q5T5N4 469 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 AGBL2Q5U5Z8 902 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 KCTD16Q68DU8 428 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 NADSYN1Q6IA69 706 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 PID1Q7Z2X4 250 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 ATPAF2Q8N5M1 289 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 SPPL3Q8TCT6 385 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 DEPDC1BQ8WUY9 529 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 PGM2Q96G03 612 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 CEP41Q9BYV8 373 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 SLC39A8Q9C0K1 460 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 RNF38Q9H0F5 515 aa14.62□□□□□ -0.07
USP39-207ENST00000450066 EIF2B3Q9NR50 452 aaKnown RBP14.62□□□□□ -0.07
USP39-207ENST00000450066 KLHL8Q9P2G9 620 aaPredicted RBP14.62□□□□□ -0.07
USP39-207ENST00000450066 A0A087WUV0 522 aaPredicted RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 C2orf71A6NGG8 1288 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 RASGRF2O14827 1237 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 ACSL4O60488 711 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 LRG1P02750 347 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 SLC11A2P49281 568 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 NDST2P52849 883 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 BBS9Q3SYG4 887 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 C5orf22Q49AR2 442 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 TEX44Q53QW1 395 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 HP1BP3Q5SSJ5 553 aaPredicted RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 CAND1Q86VP6 1230 aaKnown RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 CHSY1Q86X52 802 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 KREMEN2Q8NCW0 462 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 ZSCAN18Q8TBC5 510 aaPredicted RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 POF1BQ8WVV4 589 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 IGSF8Q969P0 613 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 RPRD1AQ96P16 312 aaPredicted RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 CCDC77Q9BR77 488 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 IL21Q9HBE4 155 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 ZNF334Q9HCZ1 680 aaPredicted RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 TLR9Q9NR96 1032 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 NUP205Q92621 2012 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms