RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 VPS4AQ9UN37 437 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 PLA2G4CQ9UP65 541 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 AGAP1Q9UPQ3 857 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 APCP25054 2843 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 AKAP9Q99996 3911 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 ZFC3H1O60293 1989 aaKnown RBP8.25□□□□□ -1.09
LINC01961-201ENST00000449954 MYH11P35749 1972 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 LY6G6EA0A0G2JKS1 128 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 A0A1W2PNR3 127 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 FAM92AA1XBS5 289 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 PMS2P1A4D2B8 440 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 NEMP2A6NFY4 417 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 SFI1A8K8P3 1242 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 WNT9AO14904 365 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 FFAR2O15552 330 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 LATO43561 262 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 HCRTO43612 131 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 ITGB3P05106 788 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 BMP4P12644 408 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 MCM7P33993 719 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 CHKAP35790 457 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 ACOT2P49753 483 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 GSK3AP49840 483 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 SRSF6Q13247 344 aaKnown RBP8.25□□□□□ -1.09
LINC01961-201ENST00000449954 ORC2Q13416 577 aaPredicted RBP8.25□□□□□ -1.09
LINC01961-201ENST00000449954 SOWAHAQ2M3V2 549 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 TBCELQ5QJ74 424 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 C1QL3Q5VWW1 255 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 DSG4Q86SJ6 1040 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 JAMLQ86YT9 394 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 KCTD17Q8N5Z5 321 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 GALNT11Q8NCW6 608 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 SORCS1Q8WY21 1168 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF274Q96GC6 653 aaPredicted RBP8.25□□□□□ -1.09
LINC01961-201ENST00000449954 RSPH9Q9H1X1 276 aaPredicted RBP8.25□□□□□ -1.09
LINC01961-201ENST00000449954 GJB4Q9NTQ9 266 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 COMMD8Q9NX08 183 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 SCHIP1Q9P0W5 487 aaPredicted RBP8.25□□□□□ -1.09
LINC01961-201ENST00000449954 DMTF1Q9Y222 760 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF510Q9Y2H8 683 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 PCDHGC4Q9Y5F7 938 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 U3KQA8 63 aa8.25□□□□□ -1.09
LINC01961-201ENST00000449954 SPG11Q96JI7 2443 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 A0A1B0GTL3 188 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 WIPF3A6NGB9 483 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 NVLO15381 856 aaKnown RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 MTSS1O43312 755 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 RNASEH1O60930 286 aaKnown RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 CYBBP04839 570 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 SLC6A4P31645 630 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 ATP5C1P36542 298 aaKnown RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 SLC5A3P53794 718 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 CYP4F2P78329 520 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 CTBSQ01459 385 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 KLRB1Q12918 225 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 ZNF177Q13360 481 aaPredicted RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 NAA30Q147X3 362 aaPredicted RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 MDH1BQ5I0G3 518 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 TMEM215Q68D42 235 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 SLFN12LQ6IEE8 588 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 ZCCHC8Q6NZY4 707 aaKnown RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 RSRC2Q7L4I2 434 aaKnown RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 HS2ST1Q7LGA3 356 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 LIMS2Q7Z4I7 341 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 VASH2Q86V25 355 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 NLRP8Q86W28 1048 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 SNX29Q8TEQ0 813 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 WFIKKN2Q8TEU8 576 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 CACTINQ8WUQ7 758 aaKnown RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 KBTBD7Q8WVZ9 684 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 WASF1Q92558 559 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 GLMNQ92990 594 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 GTF3C6Q969F1 213 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 ARRDC3Q96B67 414 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 CATSPER2Q96P56 530 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 PRSS16Q9NQE7 514 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 IL37Q9NZH6 218 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 KCND2Q9NZV8 630 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 CHORDC1Q9UHD1 332 aaPredicted RBP8.24□□□□□ -1.09
LINC01961-201ENST00000449954 UBE4BO95155 1302 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 NAV3Q8IVL0 2385 aa8.24□□□□□ -1.09
LINC01961-201ENST00000449954 KIF26BQ2KJY2 2108 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 E9PMD0 336 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 OIP5O43482 229 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 RNASEH2AO75792 299 aaKnown RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 PIAS2O75928 621 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 PRKCGP05129 697 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 CENPBP07199 599 aaPredicted RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 KRT7P08729 469 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 GIMD1P0DJR0 217 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 PLCG1P19174 1290 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 WARSP23381 471 aaKnown RBP8.23□□□□□ -1.09
LINC01961-201ENST00000449954 LMO2P25791 158 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 COL8A1P27658 744 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 CD82P27701 267 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 PSMA5P28066 241 aa8.23□□□□□ -1.09
LINC01961-201ENST00000449954 UQCRFS1P47985 274 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms