RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 UNC5BQ8IZJ1 945 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 ST13P4Q8IZP2 240 aaPredicted RBP17.28■□□□□ 0.36
SNHG17-207ENST00000449469 LRRN4Q8WUT4 740 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 ZMAT2Q96NC0 199 aaKnown RBP17.28■□□□□ 0.36
SNHG17-207ENST00000449469 CENPKQ9BS16 269 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 C16orf70Q9BSU1 422 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 KLHL4Q9C0H6 718 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 SNTG2Q9NY99 539 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 TUBGCP4Q9UGJ1 667 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 PRPF19Q9UMS4 504 aaKnown RBP17.28■□□□□ 0.36
SNHG17-207ENST00000449469 PSAT1Q9Y617 370 aa17.28■□□□□ 0.36
SNHG17-207ENST00000449469 H3BRB1 525 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 PIRO00625 290 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 CASQ2O14958 399 aaPredicted RBP17.27■□□□□ 0.36
SNHG17-207ENST00000449469 FAM163BP0C2L3 166 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 Q3C1V9 767 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 TAPT1Q6NXT6 567 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 EPGNQ6UW88 154 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 SETD3Q86TU7 594 aaPredicted RBP17.27■□□□□ 0.36
SNHG17-207ENST00000449469 FAM131BQ86XD5 332 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 DEFB106AQ8N104 65 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 ZNF567Q8N184 647 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 FBXW8Q8N3Y1 598 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 KBTBD7Q8WVZ9 684 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 KCTD13Q8WZ19 329 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 BTBD9Q96Q07 612 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 R3HDMLQ9H3Y0 253 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 DPEP3Q9H4B8 488 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 TUT1Q9H6E5 874 aaKnown RBP17.27■□□□□ 0.36
SNHG17-207ENST00000449469 ELP3Q9H9T3 547 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 PNPOQ9NVS9 261 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 BCAP29Q9UHQ4 241 aa17.27■□□□□ 0.36
SNHG17-207ENST00000449469 RRN3P2A6NIE6 340 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 PPEF2O14830 753 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 HSPA4LO95757 839 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 HOXD8P13378 290 aaPredicted RBP17.27■□□□□ 0.35
SNHG17-207ENST00000449469 AXLP30530 894 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 CRADDP78560 199 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 ITGA9Q13797 1035 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 RNF220Q5VTB9 566 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 CLEC14AQ86T13 490 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 TMEM126BQ8IUX1 230 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 SULF1Q8IWU6 871 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 DCLK2Q8N568 766 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 APPL2Q8NEU8 664 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 NTAN1Q96AB6 310 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 CNDP1Q96KN2 507 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 NPY6RQ99463 290 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 SERPINI1Q99574 410 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 PRDM12Q9H4Q4 367 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 VANGL2Q9ULK5 521 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 ANKRD6Q9Y2G4 727 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 TRIP11Q15643 1979 aa17.27■□□□□ 0.35
SNHG17-207ENST00000449469 DCLK1O15075 740 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 ITGAXP20702 1163 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 HOXA11P31270 313 aaPredicted RBP17.26■□□□□ 0.35
SNHG17-207ENST00000449469 HCAR3P49019 387 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 CCNIQ14094 377 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 SV2CQ496J9 727 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 ZNF467Q7Z7K2 595 aaPredicted RBP17.26■□□□□ 0.35
SNHG17-207ENST00000449469 CCNYQ8ND76 341 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 VAT1Q99536 393 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 HNRNPABQ99729 332 aaKnown RBP17.26■□□□□ 0.35
SNHG17-207ENST00000449469 TRHDEQ9UKU6 1024 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 POMPQ9Y244 141 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 EEF2KO00418 725 aaKnown RBP17.26■□□□□ 0.35
SNHG17-207ENST00000449469 TRIM13O60858 407 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 ERVK-10P10266 1014 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 COX4I1P13073 169 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 UQCRBP14927 111 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 NPY2RP49146 381 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 MTTPP55157 894 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 SCAPQ12770 1279 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 TBL3Q12788 808 aaKnown RBP17.26■□□□□ 0.35
SNHG17-207ENST00000449469 MED21Q13503 144 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 ITPRIPL1Q6GPH6 555 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 RAPH1Q70E73 1250 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 CATSPER4Q7RTX7 472 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 PYROXD2Q8N2H3 581 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 SLC7A14Q8TBB6 771 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 SLC2A14Q8TDB8 520 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 SLC26A7Q8TE54 656 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 FAM149B1Q96BN6 582 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 DCPSQ96C86 337 aaKnown RBP17.26■□□□□ 0.35
SNHG17-207ENST00000449469 SLC2A13Q96QE2 648 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 DUSP16Q9BY84 665 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 CASS4Q9NQ75 786 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 KLHL8Q9P2G9 620 aaPredicted RBP17.26■□□□□ 0.35
SNHG17-207ENST00000449469 SLC17A6Q9P2U8 582 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 MFHAS1Q9Y4C4 1052 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 SLC4A7Q9Y6M7 1214 aa17.26■□□□□ 0.35
SNHG17-207ENST00000449469 PDCD11Q14690 1871 aaKnown RBP17.25■□□□□ 0.35
SNHG17-207ENST00000449469 SLCO1B7G3V0H7 640 aa17.25■□□□□ 0.35
SNHG17-207ENST00000449469 SNUPNO95149 360 aaKnown RBP17.25■□□□□ 0.35
SNHG17-207ENST00000449469 ZNF286BP0CG31 522 aa17.25■□□□□ 0.35
SNHG17-207ENST00000449469 THRAP10827 490 aa17.25■□□□□ 0.35
SNHG17-207ENST00000449469 NCF2P19878 526 aaPredicted RBP17.25■□□□□ 0.35
SNHG17-207ENST00000449469 TAF6P49848 677 aa17.25■□□□□ 0.35
SNHG17-207ENST00000449469 C16orf89Q6UX73 402 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms