RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 PARP6Q2NL67 630 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 TTC39BQ5VTQ0 682 aaPredicted RBP16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 TMCO2Q7Z6W1 182 aaPredicted RBP16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 NPWQ8N729 165 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 VWCEQ96DN2 955 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 EPAS1Q99814 870 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 EIF2B3Q9NR50 452 aaKnown RBP16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 ABCC13Q9NSE7 274 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 ZNF180Q9UJW8 692 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 ARL2BPQ9Y2Y0 163 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 RAD54BQ9Y620 910 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 NCAM2O15394 837 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 HOXA2O43364 376 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 VNN2O95498 520 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 CPB1P15086 417 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 PSMB4P28070 264 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 SCTRP47872 440 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 TRMT10BQ6PF06 316 aaKnown RBP16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 NUP93Q8N1F7 819 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 FUBP3Q96I24 572 aaKnown RBP eCLIP16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 CRISPLD2Q9H0B8 497 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 SIK2Q9H0K1 926 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 SMYD2Q9NRG4 433 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 ABCF3Q9NUQ8 709 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 PRKAG3Q9UGI9 489 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 PCDHA11Q9Y5I1 949 aa16.52■□□□□ 0.24
AP000253.1-201ENST00000449339 IRAK2O43187 625 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 LPXNO60711 386 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 KRT37O76014 449 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 LRIG2O94898 1065 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 EIF4EBP2Q13542 120 aaPredicted RBP16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 LRRC8BQ6P9F7 803 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 RNF19BQ6ZMZ0 732 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 SH2D5Q6ZV89 423 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 STAMBPL1Q96FJ0 436 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 C8orf48Q96LL4 319 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 TRIM62Q9BVG3 475 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 MRPL9Q9BYD2 267 aaKnown RBP16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 C12orf65Q9H3J6 166 aaKnown RBP16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 SLCO1B3Q9NPD5 702 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 GMIPQ9P107 970 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 IGSF9Q9P2J2 1179 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 SLC17A7Q9P2U7 560 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 PHTF1Q9UMS5 762 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 SHROOM3Q8TF72 1996 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 OR6C75A6NL08 312 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 TRIM49D1C9J1S8 452 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 SRGAP2BP0DMP2 458 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 PYGBP11216 843 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 EPHB2P29323 1055 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 ZNF135P52742 658 aaPredicted RBP16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 SLC18A2Q05940 514 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 CASC4Q6P4E1 433 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 PID1Q7Z2X4 250 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 CCDC63Q8NA47 563 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 DEPDC1BQ8WUY9 529 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 PLCD4Q9BRC7 762 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 GGT7Q9UJ14 662 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 STARD13Q9Y3M8 1113 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 PLXNA3P51805 1871 aa16.51■□□□□ 0.23
AP000253.1-201ENST00000449339 WDR27A2RRH5 827 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 MTMR11A4FU01 709 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 SDR42E2A6NKP2 422 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 FAM159BA6NKW6 160 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 ZNF189O75820 626 aaPredicted RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 SNRPAP09012 282 aaKnown RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 CSH1P0DML2 217 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 CSH2P0DML3 217 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 CRADDP78560 199 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 PPIDQ08752 370 aaKnown RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 LGSNQ5TDP6 509 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 BEND5Q7L4P6 421 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 LRRC43Q8N309 656 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 APOPT1Q96IL0 206 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 TOX2Q96NM4 488 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 SEPT5Q99719 369 aaPredicted RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 TMEM175Q9BSA9 504 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 SMOC2Q9H3U7 446 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 PIH1D1Q9NWS0 290 aaKnown RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 WBP1LQ9NX94 342 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 KLHL14Q9P2G3 628 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 KLHL8Q9P2G9 620 aaPredicted RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 TBX21Q9UL17 535 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 SCML2Q9UQR0 700 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 ADAM12O43184 909 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 TBC1D4O60343 1298 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 UGT1A9O60656 530 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 RPL17P18621 184 aaKnown RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 MX2P20592 715 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 PTPN3P26045 913 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 SERPINB6P35237 376 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 SESN2P58004 480 aaPredicted RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 MGAT5BQ3V5L5 792 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 FAM117BQ6P1L5 589 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 ZNF75CPQ92670 426 aaPredicted RBP16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 BRD8Q9H0E9 1235 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 UGT1A7Q9HAW7 530 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 UGT1A10Q9HAW8 530 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 UGT1A8Q9HAW9 530 aa16.5■□□□□ 0.23
AP000253.1-201ENST00000449339 TMEM39AQ9NV64 488 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms