RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FAM78AQ5JUQ0 283 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 RFWD3Q6PCD5 774 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 C1orf228Q6PIY5 440 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 GET4Q7L5D6 327 aaPredicted RBP19.81■□□□□ 0.76
RPS28-202ENST00000449223 KLHL7Q8IXQ5 586 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 CCDC26Q8TAB7 109 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 GRK7Q8WTQ7 553 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 FAM161BQ96MY7 647 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 BRD8Q9H0E9 1235 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 TBC1D14Q9P2M4 693 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 AMACRQ9UHK6 382 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 NUP205Q92621 2012 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 A0A1B0GVM2 712 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 BCLAF3A2AJT9 711 aaKnown RBP19.81■□□□□ 0.76
RPS28-202ENST00000449223 TCAF2A6NFQ2 919 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 CLDN11O75508 207 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 CNTN5O94779 1100 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 RBP3P10745 1247 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 MX2P20592 715 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 NDST2P52849 883 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 TERF1P54274 439 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 EIF3EP60228 445 aaKnown RBP19.81■□□□□ 0.76
RPS28-202ENST00000449223 C8orf74Q6P047 294 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 LRRC49Q8IUZ0 686 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 ARHGAP12Q8IWW6 846 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 MICALL1Q8N3F8 863 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 HJURPQ8NCD3 748 aaPredicted RBP19.81■□□□□ 0.76
RPS28-202ENST00000449223 FAM118BQ9BPY3 351 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 NDFIP2Q9NV92 336 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 SPTBN5Q9NRC6 3674 aaKnown RBP19.8■□□□□ 0.76
RPS28-202ENST00000449223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.8■□□□□ 0.76
RPS28-202ENST00000449223 RAD51CO43502 376 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 FCARP24071 287 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 PTGIRP43119 386 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 DR1Q01658 176 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 PDK1Q15118 436 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 SYDE1Q6ZW31 735 aaPredicted RBP19.8■□□□□ 0.76
RPS28-202ENST00000449223 CCDC105Q8IYK2 499 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 UBXN4Q92575 508 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 E2F7Q96AV8 911 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 HDAC11Q96DB2 347 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 RTP4Q96DX8 246 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 QKIQ96PU8 341 aaKnown RBP eCLIP19.8■□□□□ 0.76
RPS28-202ENST00000449223 CDX2Q99626 313 aaPredicted RBP19.8■□□□□ 0.76
RPS28-202ENST00000449223 LRRC1Q9BTT6 524 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 NEU2Q9Y3R4 380 aa19.8■□□□□ 0.76
RPS28-202ENST00000449223 C5orf42Q9H799 3197 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 CFAP69A5D8W1 941 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 FAM187AA6NFU0 413 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 BHMG1C9JSJ3 638 aaPredicted RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 SLC9A3R1O14745 358 aaPredicted RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 PPP1R12AO14974 1030 aaPredicted RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 ECEL1O95672 775 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 STIP1P31948 543 aaKnown RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 KCNJ1P48048 391 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 SGSHP51688 502 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 YBEYP58557 167 aaPredicted RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 RPS24P62847 133 aaKnown RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 PRKD1Q15139 912 aaPredicted RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 SLC45A4Q5BKX6 768 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 TEX35Q5T0J7 233 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 SETD3Q86TU7 594 aaPredicted RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 ALLCQ8N6M5 410 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 POMKQ9H5K3 350 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 NOL6Q9H6R4 1146 aaKnown RBP19.79■□□□□ 0.76
RPS28-202ENST00000449223 CD207Q9UJ71 328 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 TBC1D30Q9Y2I9 924 aa19.79■□□□□ 0.76
RPS28-202ENST00000449223 NYNRINQ9P2P1 1898 aaKnown RBP19.78■□□□□ 0.76
RPS28-202ENST00000449223 TARSL2A2RTX5 802 aaKnown RBP19.78■□□□□ 0.76
RPS28-202ENST00000449223 TYW5A2RUC4 315 aaKnown RBP19.78■□□□□ 0.76
RPS28-202ENST00000449223 GARSP41250 739 aaKnown RBP19.78■□□□□ 0.76
RPS28-202ENST00000449223 PPIDQ08752 370 aaKnown RBP19.78■□□□□ 0.76
RPS28-202ENST00000449223 SNX1Q13596 522 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 MPPE1Q53F39 396 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 CCDC70Q6NSX1 233 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 TFAP2DQ7Z6R9 452 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 CDKL3Q8IVW4 592 aaPredicted RBP19.78■□□□□ 0.76
RPS28-202ENST00000449223 TDRD5Q8NAT2 981 aaKnown RBP19.78■□□□□ 0.76
RPS28-202ENST00000449223 RUBCNQ92622 972 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 RSPRY1Q96DX4 576 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 TMA16Q96EY4 203 aaKnown RBP19.78■□□□□ 0.76
RPS28-202ENST00000449223 GUCD1Q96NT3 240 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 LRRC3BQ96PB8 259 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 TSGA13Q96PP4 275 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 ZNF148Q9UQR1 794 aa19.78■□□□□ 0.76
RPS28-202ENST00000449223 TTI1O43156 1089 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 GAS8O95995 478 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 OR1E1P30953 314 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 PARP15Q460N3 678 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 ZNF783Q6ZMS7 281 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 ZC3H18Q86VM9 953 aaKnown RBP19.77■□□□□ 0.76
RPS28-202ENST00000449223 JAMLQ86YT9 394 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 TP53INP2Q8IXH6 220 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 CFAP52Q8N1V2 620 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 OSCP1Q8WVF1 389 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 TFB1MQ8WVM0 346 aaKnown RBP19.77■□□□□ 0.76
RPS28-202ENST00000449223 MYLIPQ8WY64 445 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 SEC14L1Q92503 715 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 FATE1Q969F0 183 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 MYADMQ96S97 322 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms