RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 VN1R2Q8NFZ6 395 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 TFB1MQ8WVM0 346 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 CMKLR1Q99788 373 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ILKAPQ9H0C8 392 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 PISDQ9UG56 409 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 XIRP1Q702N8 1843 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 SCN11AQ9UI33 1791 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 APOL1O14791 398 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 BMP8BP34820 402 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RUNX3Q13761 415 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RAB33AQ14088 237 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ARHGAP40Q5TG30 622 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 C1orf53Q5VUE5 145 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF776Q68DI1 518 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 TSSK4Q6SA08 328 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 EID2Q8N6I1 236 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 NCSTNQ92542 709 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 NXPE2Q96DL1 559 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 CNGB3Q9NQW8 809 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 HOMER3Q9NSC5 361 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 GIMAP4Q9NUV9 329 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 COQ3Q9NZJ6 369 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 GMIPQ9P107 970 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 SPASTQ9UBP0 616 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 PCDHGA4Q9Y5G9 962 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRPM7Q96QT4 1865 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ANKRD63C9JTQ0 380 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 SCAMP1O15126 338 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 PSMD3O43242 534 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 DGKIO75912 1065 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ATG7O95352 703 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RPN2P04844 631 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 SERPINF2P08697 491 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ENO2P09104 434 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ITGALP20701 1170 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 CDH3P22223 829 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ELP6Q0PNE2 266 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZRANB3Q5FWF4 1079 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RAP1GAP2Q684P5 730 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCDC81Q6ZN84 652 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 USP49Q70CQ1 688 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 USP6NLQ92738 828 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 MSANTD3Q96H12 275 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 MAP3K3Q99759 626 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 GDF15Q99988 308 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 CNPY3Q9BT09 278 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 MRFAP1Q9Y605 127 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 CACNA1IQ9P0X4 2223 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RASA4BC9J798 803 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RASA4O43374 803 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 LDB2O43679 373 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 CDC40O60508 579 aaKnown RBP eCLIP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ABOP16442 354 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 DDX5P17844 614 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RRM1P23921 792 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 KPNA2P52292 529 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RBM10P98175 930 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RCN2Q14257 317 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF655Q8N720 491 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 NUP85Q9BW27 656 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 AGXT2Q9BYV1 514 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 DRC3Q9H069 523 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 VAV3Q9UKW4 847 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 AP3B1O00203 1094 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 TGM5O43548 720 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RNF40O75150 1001 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 LRCH4O75427 683 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 WFS1O76024 890 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 FTLP02792 175 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF131P52739 623 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 TGM3Q08188 693 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 HNRNPDQ14103 355 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 GRM3Q14832 879 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 SHC4Q6S5L8 630 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ANKRD52Q8NB46 1076 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 BBOF1Q8ND07 529 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 HSPA12BQ96MM6 686 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIM45Q9H8W5 580 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 C2orf81A6NN90 581 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 AVILO75366 819 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 PIM1P11309 404 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RWDD2BP57060 319 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 RALGDSQ12967 914 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 PIGHQ14442 188 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 LLGL1Q15334 1064 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 TCP11X2Q5H9J9 407 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 C3orf38Q5JPI3 329 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 USP45Q70EL2 814 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 KBTBD6Q86V97 674 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 GPR156Q8NFN8 814 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 KCNE4Q8WWG9 221 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM186AA6NE01 2351 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 EVPLQ92817 2033 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 DNAJC13O75165 2243 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 DYTNA2CJ06 578 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 RASGRF2O14827 1237 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ACSL4O60488 711 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 KLHL18O94889 574 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 PLGP00747 810 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ALDH3A1P30838 453 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms