RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 BACE2Q9Y5Z0 518 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 MOCS2O96007 188 aaPredicted RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 CPP00450 1065 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 GSTA2P09210 222 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 ATF6P18850 670 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 KRT15P19012 456 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 MSH2P43246 934 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 CCT5P48643 541 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 TBX4P57082 545 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 EFEMP1Q12805 493 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 ZBTB17Q13105 803 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 PIK3R6Q5UE93 754 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 C14orf80Q86SX3 495 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 PRPF39Q86UA1 669 aaKnown RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 ARHGAP12Q8IWW6 846 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 ZNF473Q8WTR7 871 aaKnown RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 TOP1MTQ969P6 601 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 VAT1Q99536 393 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 PRMT1Q99873 361 aaKnown RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 CATSPERBQ9H7T0 1116 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 GREB1Q4ZG55 1949 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 E9PAM4 449 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 TBX18O95935 607 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 ZDHHC11BP0C7U3 371 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 CD68P34810 354 aaPredicted RBP18.16■□□□□ 0.5
LMNA-208ENST00000448611 TUBP50607 506 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 PSMD5Q16401 504 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 TEX44Q53QW1 395 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 UNC5AQ6ZN44 842 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 LZTR1Q8N653 840 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 MZB1Q8WU39 189 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 ZNF317Q96PQ6 595 aaPredicted RBP18.16■□□□□ 0.5
LMNA-208ENST00000448611 TRABDQ9H4I3 376 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 KIF9Q9HAQ2 790 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 OLA1Q9NTK5 396 aaKnown RBP18.16■□□□□ 0.5
LMNA-208ENST00000448611 TRHDEQ9UKU6 1024 aa18.16■□□□□ 0.5
LMNA-208ENST00000448611 SLC38A8A6NNN8 435 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 TRDMT1O14717 391 aaKnown RBP18.15■□□□□ 0.5
LMNA-208ENST00000448611 ZBTB24O43167 697 aaPredicted RBP18.15■□□□□ 0.5
LMNA-208ENST00000448611 RPL17P18621 184 aaKnown RBP18.15■□□□□ 0.5
LMNA-208ENST00000448611 PRKCHP24723 683 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 LRRC26Q2I0M4 334 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 ZNF683Q8IZ20 524 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 ANKRD42Q8N9B4 389 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 GIPC2Q8TF65 315 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 SLC44A1Q8WWI5 657 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 ZNF689Q96CS4 500 aaPredicted RBP18.15■□□□□ 0.5
LMNA-208ENST00000448611 CHMP6Q96FZ7 201 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 TSGA13Q96PP4 275 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 RC3H2Q9HBD1 1191 aaKnown RBP18.15■□□□□ 0.5
LMNA-208ENST00000448611 MAD1L1Q9Y6D9 718 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 LTBP2Q14767 1821 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 ABHD14A-ACY1A0A1B0GW23 586 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 A0A1W2PPM1 405 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 APOEP02649 317 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 OR1D2P34982 312 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 COG7P83436 770 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 LRRC14Q15048 493 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 TRIP4Q15650 581 aaPredicted RBP18.15■□□□□ 0.5
LMNA-208ENST00000448611 AFMIDQ63HM1 303 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 MGARPQ8TDB4 240 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 TEKT5Q96M29 485 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 TRIM56Q9BRZ2 755 aaKnown RBP18.15■□□□□ 0.5
LMNA-208ENST00000448611 TTLL2Q9BWV7 592 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 GBA3Q9H227 469 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 NDFIP2Q9NV92 336 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 MARCH2Q9P0N8 246 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 RSPH14Q9UHP6 348 aa18.15■□□□□ 0.5
LMNA-208ENST00000448611 WASH4PA8MWX3 477 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 PRPF4O43172 522 aaKnown RBP eCLIP18.14■□□□□ 0.494e-6■□□□□ 10.1
LMNA-208ENST00000448611 IGLV3-27P01718 113 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 DRD4P21917 467 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 CCNCP24863 283 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 ITGB8P26012 769 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 SLC18A1P54219 525 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 ARHGAP36Q6ZRI8 547 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 TMCO2Q7Z6W1 182 aaPredicted RBP18.14■□□□□ 0.49
LMNA-208ENST00000448611 UBE2Q1Q7Z7E8 422 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 RTL3Q8N8U3 475 aaKnown RBP18.14■□□□□ 0.49
LMNA-208ENST00000448611 GSDMBQ8TAX9 411 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 CEP295NLQ96MC4 621 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 AGAP3Q96P47 875 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 SLC39A8Q9C0K1 460 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 FAM107BQ9H098 131 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 PCDHA11Q9Y5I1 949 aa18.14■□□□□ 0.49
LMNA-208ENST00000448611 MYO18AQ92614 2054 aaKnown RBP18.14■□□□□ 0.49
LMNA-208ENST00000448611 FAM47DPA6NHR8 397 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 SDR42E2A6NKP2 422 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 DFFAO00273 331 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 SUN1O94901 812 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 AP2A1O95782 977 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 JCHAINP01591 159 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 IFNAR2P48551 515 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 MS4A13Q5J8X5 152 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 C10orf120Q5SQS8 335 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 STEAP4Q687X5 459 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 KCTD11Q693B1 232 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 ITPRIPL1Q6GPH6 555 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 MIB1Q86YT6 1006 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 C4orf33Q8N1A6 199 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms