RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 IARS2Q9NSE4 1012 aaKnown RBP8.71□□□□□ -1.01
PTPN3-204ENST00000446349 RAD51CO43502 376 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 ALPPL2P10696 532 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 RAD23AP54725 363 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 FBXO39Q8N4B4 442 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 PNKPQ96T60 521 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 ZSCAN32Q9NX65 697 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 ARHGAP28Q9P2N2 729 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 GRM6O15303 877 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 CD3EAPO15446 510 aaKnown RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 COX7A2P14406 83 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 CHN1P15882 459 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 BDNFP23560 247 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 IL2P60568 153 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 CNTN2Q02246 1040 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 NT5DC1Q5TFE4 455 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 TMEM132CQ8N3T6 1108 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 SHDQ96IW2 340 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 ADI1Q9BV57 179 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 ADNPQ9H2P0 1102 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 IL17RBQ9NRM6 502 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 ANKDD1BA6NHY2 528 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 FYNP06241 537 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 PLEKP08567 350 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 CYTH1Q15438 398 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 RAB30Q15771 203 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 AFTPHQ6ULP2 937 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 DPP10Q8N608 796 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 SLC22A17Q8WUG5 538 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 TKTL2Q9H0I9 626 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 KCNMB3Q9NPA1 279 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 COL3A1P02461 1466 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 AKAP3O75969 853 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 WDR47O94967 919 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 PBLDP30039 288 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 WEE1P30291 646 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 MPPE1Q53F39 396 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 KATNAL2Q8IYT4 538 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 CCDC185Q8N715 623 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 IRGQQ8WZA9 623 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 BHMTQ93088 406 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 ACO2Q99798 780 aaKnown RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 ADAM28Q9UKQ2 775 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 ARIH1Q9Y4X5 557 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 PXDNQ92626 1479 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 ADGRA3Q8IWK6 1321 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 TMEM120BA0PK00 339 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 STAU1O95793 577 aaKnown RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 SOX6P35712 828 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 FLT3LGP49771 235 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 AP1ARQ63HQ0 302 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 FAM45BPQ6NSW5 357 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 SH3BP5LQ7L8J4 393 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 PRPF39Q86UA1 669 aaKnown RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 SLC47A2Q86VL8 602 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 MOSPD2Q8NHP6 518 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 FAM45AQ8TCE6 357 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 MS4A14Q96JA4 679 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 PDGFDQ9GZP0 370 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-204ENST00000446349 FAM105AQ9NUU6 356 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 FAM198AQ9UFP1 575 aa8.71□□□□□ -1.02
PTPN3-204ENST00000446349 LMO7Q8WWI1 1683 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 SEPT4O43236 478 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 DDX6P26196 483 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 MLH1P40692 756 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 KDSRQ06136 332 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 NTRK3Q16288 839 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 KYAT3Q6YP21 454 aaKnown RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 KCNMB4Q86W47 210 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 MYCBPAPQ8TBZ2 947 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 CNDP1Q96KN2 507 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 H3BM21 787 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 VSNL1P62760 191 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 GALNT18Q6P9A2 607 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 TCAIMQ8N3R3 496 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 AGR3Q8TD06 166 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 CAPNS2Q96L46 248 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 SAMD11Q96NU1 681 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 CORO1BQ9BR76 489 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 USP20Q9Y2K6 914 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ROBO3Q96MS0 1386 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 CHADO15335 359 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 FGFR1P11362 822 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 CDH8P55286 799 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 SLC20A2Q08357 652 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 NFIL3Q16649 462 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 CCDC157Q569K6 752 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 MED8Q96G25 268 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ST3GAL5Q9UNP4 418 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ZNF711Q9Y462 761 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 WWP2O00308 870 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 MLYCDO95822 493 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 MMP3P08254 477 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ANXA5P08758 320 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 SPIDRQ14159 915 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ITIH4Q14624 930 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ADCK1Q86TW2 530 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 PSTKQ8IV42 348 aaKnown RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 TRIM51Q9BSJ1 452 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms