RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 ZBTB39O15060 712 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 ENDOD1O94919 500 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 OR6A2O95222 327 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 GLUD1P00367 558 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 CYP3A4P08684 503 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 OTUD4Q01804 1114 aaKnown RBP11.95□□□□□ -0.5
FN1-212ENST00000446046 POU6F1Q14863 301 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 SLC9A5Q14940 896 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 OR56A4Q8NGH8 313 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 ACTRT1Q8TDG2 376 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 SH3BP4Q9P0V3 963 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 MARCOQ9UEW3 520 aaPredicted RBP11.95□□□□□ -0.5
FN1-212ENST00000446046 ATP6V1HQ9UI12 483 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 SHOC2Q9UQ13 582 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
FN1-212ENST00000446046 MYOM1P52179 1685 aa11.95□□□□□ -0.5
FN1-212ENST00000446046 FOXN1O15353 648 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ERBB2P04626 1255 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 SKIV2L2P42285 1042 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 SLC6A3Q01959 620 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 KIAA1324Q6UXG2 1013 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 PALB2Q86YC2 1186 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 RIPOR3Q96MK2 946 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ABCG4Q9H172 646 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ALG13Q9NP73 1137 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.94□□□□□ -0.51e-24■■■■□ 24.1
FN1-212ENST00000446046 ADGRA3Q8IWK6 1321 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 E9PBE3 544 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 IL2P60568 153 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 RPS7P62081 194 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 BNC1Q01954 994 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 SLC44A2Q8IWA5 706 aaPredicted RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 ZFP28Q8NHY6 868 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 REXO5Q96IC2 774 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 GAD1Q99259 594 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 TTLL2Q9BWV7 592 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 MRTO4Q9UKD2 239 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 NUP205Q92621 2012 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 SMIM31A0A1B0GVY4 71 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 PROSCO94903 275 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 KLRK1P26718 216 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 MLH1P40692 756 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 SLC12A3P55017 1021 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 NUP107P57740 925 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ATAT1Q5SQI0 421 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 CYB5D1Q6P9G0 228 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 POMGNT2Q8NAT1 580 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 EDEM1Q92611 657 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ABTB1Q969K4 478 aaPredicted RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 TBL1YQ9BQ87 522 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ZYG11BQ9C0D3 744 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 PCDHA3Q9Y5H8 950 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 XPO1O14980 1071 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 ZNF185O15231 689 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 APODP05090 189 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ANXA5P08758 320 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ST13P50502 369 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 ANTXR2P58335 489 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 RBM43Q6ZSC3 357 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 TRPM8Q7Z2W7 1104 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 FBXO39Q8N4B4 442 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 SLC28A3Q9HAS3 691 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 KCTD5Q9NXV2 234 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 C2CD2Q9Y426 696 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 CCDC159P0C7I6 412 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 PTPN1P18031 435 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 NTSP30990 170 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 GPD2P43304 727 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 BOP1Q14137 746 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 GPSM1Q86YR5 675 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 FAIM2Q9BWQ8 316 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 SUCOQ9UBS9 1254 aaKnown RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 PRKAG3Q9UGI9 489 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 NCF1BA6NI72 391 aaPredicted RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 OR6C75A6NL08 312 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 NCF1CA8MVU1 366 aaPredicted RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 WWP2O00308 870 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 CXCL14O95715 111 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 DNTTP04053 509 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 NCF1P14598 390 aaPredicted RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 TYMPP19971 482 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 TALDO1P37837 337 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 KYNUQ16719 465 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 FAM110CQ1W6H9 321 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ZSCAN18Q8TBC5 510 aaPredicted RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 THAP11Q96EK4 314 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 IL1RL2Q9HB29 575 aa11.94□□□□□ -0.5
FN1-212ENST00000446046 ARIH1Q9Y4X5 557 aaPredicted RBP11.94□□□□□ -0.5
FN1-212ENST00000446046 CES2O00748 559 aa11.93□□□□□ -0.5
FN1-212ENST00000446046 TRDMT1O14717 391 aaKnown RBP11.93□□□□□ -0.5
FN1-212ENST00000446046 SLC25A12O75746 678 aa11.93□□□□□ -0.5
FN1-212ENST00000446046 YBX3P16989 372 aaKnown RBP eCLIP11.93□□□□□ -0.52e-58■□□□□ 9.3
FN1-212ENST00000446046 SERPINH1P50454 418 aaKnown RBP11.93□□□□□ -0.5
FN1-212ENST00000446046 KCNMB4Q86W47 210 aa11.93□□□□□ -0.5
FN1-212ENST00000446046 HSFY1Q96LI6 401 aa11.93□□□□□ -0.5
FN1-212ENST00000446046 TKTL2Q9H0I9 626 aa11.93□□□□□ -0.5
FN1-212ENST00000446046 PABPC3Q9H361 631 aaKnown RBP11.93□□□□□ -0.5
FN1-212ENST00000446046 BRD9Q9H8M2 597 aa11.93□□□□□ -0.5
FN1-212ENST00000446046 ATRNO75882 1429 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms