RNA–Protein interactions for RNA: ENST00000445237.2

HDAC7-214, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 364 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-214ENST00000445237 PABPC3Q9H361 631 aaKnown RBP18.41■□□□□ 0.54
HDAC7-214ENST00000445237 GAREM1Q9H706 876 aa18.41■□□□□ 0.54
HDAC7-214ENST00000445237 SERGEFQ9UGK8 458 aa18.41■□□□□ 0.54
HDAC7-214ENST00000445237 SLC12A6Q9UHW9 1150 aa18.41■□□□□ 0.54
HDAC7-214ENST00000445237 NUMA1Q14980 2115 aa18.41■□□□□ 0.54
HDAC7-214ENST00000445237 HSF2BPO75031 334 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 MOCS3O95396 460 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 PROS1P07225 676 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 GLI1P08151 1106 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 PDGFRAP16234 1089 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 ABCB4P21439 1286 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 MZF1P28698 734 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-214ENST00000445237 GGCXP38435 758 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 IRAK1P51617 712 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 CENPCQ03188 943 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 NME3Q13232 169 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 HLA-BQ31612 363 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 PTPN20Q4JDL3 420 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 OLFML1Q6UWY5 402 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 LAYNQ6UX15 382 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 MMAAQ8IVH4 418 aaKnown RBP18.4■□□□□ 0.54
HDAC7-214ENST00000445237 FAM114A1Q8IWE2 563 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 FAM71AQ8IYT1 594 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
HDAC7-214ENST00000445237 NOX5Q96PH1 765 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 SYNCQ9H7C4 482 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 TM9SF3Q9HD45 589 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 ASNSD1Q9NWL6 643 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 FBXL12Q9NXK8 326 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 KLK13Q9UKR3 277 aa18.4■□□□□ 0.54
HDAC7-214ENST00000445237 FNDC3AQ9Y2H6 1198 aaKnown RBP18.4■□□□□ 0.54
HDAC7-214ENST00000445237 FAM47DPA6NHR8 397 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 PES1O00541 588 aaKnown RBP18.39■□□□□ 0.53
HDAC7-214ENST00000445237 MID1O15344 667 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 RNASEH1O60930 286 aaKnown RBP18.39■□□□□ 0.53
HDAC7-214ENST00000445237 SRPRAP08240 638 aaKnown RBP18.39■□□□□ 0.53
HDAC7-214ENST00000445237 SLC2A3P11169 496 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 CCR1P32246 355 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 MATKP42679 507 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 AFF3P51826 1226 aaKnown RBP18.39■□□□□ 0.53
HDAC7-214ENST00000445237 KCNMA1Q12791 1236 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 RAPGEF1Q13905 1077 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 TRIP6Q15654 476 aaKnown RBP18.39■□□□□ 0.53
HDAC7-214ENST00000445237 CST6Q15828 149 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 RNF219Q5W0B1 726 aaPredicted RBP18.39■□□□□ 0.53
HDAC7-214ENST00000445237 FBXL22Q6P050 247 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 CHCHD4Q8N4Q1 142 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 KDM1BQ8NB78 822 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 IGSF8Q969P0 613 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 FAM129BQ96TA1 746 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 TMEM121BQ9BXQ6 578 aaPredicted RBP18.39■□□□□ 0.53
HDAC7-214ENST00000445237 NUP62CLQ9H1M0 184 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 SGK2Q9HBY8 427 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 NCKAP1Q9Y2A7 1128 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 FHOD1Q9Y613 1164 aa18.39■□□□□ 0.53
HDAC7-214ENST00000445237 PCNX2A6NKB5 2137 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 EDDM13A0A1B0GTR0 161 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 A0A1W2PP55 124 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 VAV1P15498 845 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 ERCC5P28715 1186 aaPredicted RBP18.38■□□□□ 0.53
HDAC7-214ENST00000445237 PSMD8P48556 350 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 RNASE9P60153 205 aaKnown RBP18.38■□□□□ 0.53
HDAC7-214ENST00000445237 SLC6A3Q01959 620 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 ARID5BQ14865 1188 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 DRAP1Q14919 205 aaPredicted RBP18.38■□□□□ 0.53
HDAC7-214ENST00000445237 KIF19Q2TAC6 998 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 RABGAP1LQ5R372 815 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 CXorf57Q6NSI4 855 aaKnown RBP18.38■□□□□ 0.53
HDAC7-214ENST00000445237 STK40Q8N2I9 435 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 SETD7Q8WTS6 366 aaKnown RBP18.38■□□□□ 0.53
HDAC7-214ENST00000445237 RPRD1AQ96P16 312 aaPredicted RBP18.38■□□□□ 0.53
HDAC7-214ENST00000445237 NEUROG2Q9H2A3 272 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 SAMSN1Q9NSI8 373 aaKnown RBP18.38■□□□□ 0.53
HDAC7-214ENST00000445237 VANGL2Q9ULK5 521 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 PCDHB9Q9Y5E1 797 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 SNX11Q9Y5W9 270 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 IGF2RP11717 2491 aa18.38■□□□□ 0.53
HDAC7-214ENST00000445237 A0A1B0GVM2 712 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 TARSL2A2RTX5 802 aaKnown RBP18.37■□□□□ 0.53
HDAC7-214ENST00000445237 TCAF2A6NFQ2 919 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 M0QYT0 321 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 KCNK3O14649 394 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 DAB1O75553 588 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 RNASEH2AO75792 299 aaKnown RBP18.37■□□□□ 0.53
HDAC7-214ENST00000445237 CER1O95813 267 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 IGHV4-34P06331 123 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 TFE3P19532 575 aaPredicted RBP18.37■□□□□ 0.53
HDAC7-214ENST00000445237 CD27P26842 260 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 SLC8A1P32418 973 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 GALCP54803 685 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 AUHQ13825 339 aaKnown RBP18.37■□□□□ 0.53
HDAC7-214ENST00000445237 HNRNPDQ14103 355 aaKnown RBP18.37■□□□□ 0.53
HDAC7-214ENST00000445237 KCNJ12Q14500 433 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 KCNT1Q5JUK3 1230 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 OTUD1Q5VV17 481 aaPredicted RBP18.37■□□□□ 0.53
HDAC7-214ENST00000445237 KIAA0895LQ68EN5 471 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 IL27RAQ6UWB1 636 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 USP30Q70CQ3 517 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 SLC26A9Q7LBE3 791 aa18.37■□□□□ 0.53
HDAC7-214ENST00000445237 C14orf80Q86SX3 495 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms