RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 H0Y626 953 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 RHOBTB1O94844 696 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 C7P10643 843 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 PDGFRAP16234 1089 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 FERP16591 822 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 POLR2EP19388 210 aaKnown RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 RFC1P35251 1148 aaPredicted RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 ID4P47928 161 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 DHPSP49366 369 aaPredicted RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 STK19P49842 368 aaPredicted RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 GSCP56915 257 aaPredicted RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 ATP11AP98196 1134 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 STARD3Q14849 445 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 BRMS1LQ5PSV4 323 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 ARCQ7LC44 396 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 ZNF571Q7Z3V5 609 aaPredicted RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 FAM131BQ86XD5 332 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 RPL10LQ96L21 214 aaKnown RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 RPRD1AQ96P16 312 aaPredicted RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 WDCPQ9H6R7 721 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 PRDM16Q9HAZ2 1276 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
PRKD3-203ENST00000443187 RRN3Q9NYV6 651 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 ADAM22Q9P0K1 906 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 ZNF212Q9UDV6 495 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 SLC12A6Q9UHW9 1150 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 STAP1Q9ULZ2 295 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 ERVW-1Q9UQF0 538 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 PCDHGA5Q9Y5G8 931 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 OR51B4Q9Y5P0 310 aa11.54□□□□□ -0.56
PRKD3-203ENST00000443187 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 TYW5A2RUC4 315 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 DRGXA6NNA5 263 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 SYNCRIPO60506 623 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 SIN3BO75182 1162 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 CAVIN2O95810 425 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 SERPINC1P01008 464 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 ATP5BP06576 529 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 VAV1P15498 845 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 ITPKAP23677 461 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 RDXP35241 583 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 NSFP46459 744 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 TPMTP51580 245 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 PLK1P53350 603 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 HDAC4P56524 1084 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 RPL7AP62424 266 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 OGDHQ02218 1023 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 RPL6Q02878 288 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 LMNB2Q03252 620 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 CDO1Q16878 200 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 WDR59Q6PJI9 974 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 LPCAT2Q7L5N7 544 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 METTL3Q86U44 580 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 MCOLN2Q8IZK6 566 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 GPR161Q8N6U8 529 aaKnown RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 MSANTD4Q8NCY6 345 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 OR2T3Q8NH03 318 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 CENPIQ92674 756 aaPredicted RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 SIPA1Q96FS4 1042 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 SPACA7Q96KW9 195 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 HAUS4Q9H6D7 363 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 ITM2CQ9NQX7 267 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 WSB2Q9NYS7 404 aaPredicted RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 MPP6Q9NZW5 540 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 KIAA1522Q9P206 1035 aaPredicted RBP11.53□□□□□ -0.56
PRKD3-203ENST00000443187 MYO6Q9UM54 1294 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 PLA2G4CQ9UP65 541 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 NEU3Q9UQ49 428 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 NUMA1Q14980 2115 aa11.53□□□□□ -0.56
PRKD3-203ENST00000443187 CEP192Q8TEP8 1941 aa11.52□□□□□ -0.56
PRKD3-203ENST00000443187 IGLV3-10A0A075B6K4 115 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 TMCO5BA8MYB1 307 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 FAM72CH0Y354 149 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 DDX3XO00571 662 aaKnown RBP eCLIP11.52□□□□□ -0.575e-7■■■■■ 40.8
PRKD3-203ENST00000443187 MAP3K13O43283 966 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
PRKD3-203ENST00000443187 ZNF217O75362 1048 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 F9P00740 461 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 SKILP12757 684 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 RRM1P23921 792 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 PRKCIP41743 596 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 PTPN9P43378 593 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 RPS14P62263 151 aaKnown RBP11.52□□□□□ -0.57
PRKD3-203ENST00000443187 ECT2LQ008S8 904 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.57
PRKD3-203ENST00000443187 FILIP1LQ4L180 1135 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 RABGAP1LQ5R372 815 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 C9orf64Q5T6V5 341 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 FAM72AQ5TYM5 149 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 HGSNATQ68CP4 663 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 ACAD10Q6JQN1 1059 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 FAM72DQ6L9T8 149 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 CYP2U1Q7Z449 544 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 C11orf74Q86VG3 221 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 FAM72BQ86X60 149 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 CCDC185Q8N715 623 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 C3orf20Q8ND61 904 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 PIGKQ92643 395 aa11.52□□□□□ -0.57
PRKD3-203ENST00000443187 TOE1Q96GM8 510 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms