RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SERTAD1Q9UHV2 236 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 ERVW-1Q9UQF0 538 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 TTC34A8MYJ7 566 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 ACSL4O60488 711 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 GABBR2O75899 941 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 NR2F2P24468 414 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 CTSOP43234 321 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-208ENST00000443046 DAOAP59103 153 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 PPP2CBP62714 309 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 PPP2CAP67775 309 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 E2F1Q01094 437 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 RHDQ02161 417 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 ADIGQ0VDE8 80 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 BST2Q10589 180 aaKnown RBP14.93□□□□□ -0.02
HMGN1-208ENST00000443046 GOLGA7BQ2TAP0 167 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 SLC45A4Q5BKX6 768 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 FSCBQ5H9T9 825 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 NUGGCQ68CJ6 796 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 NAPEPLDQ6IQ20 393 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 UNC45BQ8IWX7 931 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 ZNF248Q8NDW4 579 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 SNRNP27Q8WVK2 155 aaKnown RBP14.93□□□□□ -0.02
HMGN1-208ENST00000443046 ZNF578Q96N58 590 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-208ENST00000443046 LRRC4Q9HBW1 653 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 CNGB3Q9NQW8 809 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 TSPAN16Q9UKR8 245 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 SSUH2Q9Y2M2 353 aa14.93□□□□□ -0.02
HMGN1-208ENST00000443046 UBR5O95071 2799 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-208ENST00000443046 EDDM13A0A1B0GTR0 161 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 DXOO77932 396 aaKnown RBP14.92□□□□□ -0.02
HMGN1-208ENST00000443046 ADH1BP00325 375 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 MT-CO3P00414 261 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 C5AR1P21730 350 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 DRD3P35462 400 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 PSMC2P35998 433 aaKnown RBP14.92□□□□□ -0.02
HMGN1-208ENST00000443046 SLC11A2P49281 568 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 OVGP1Q12889 678 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 ZNF211Q13398 564 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-208ENST00000443046 PITRM1Q5JRX3 1037 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 CDCP2Q5VXM1 449 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 FAM186BQ8IYM0 893 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 CEP57L1Q8IYX8 460 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 SLC25A45Q8N413 288 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 HJURPQ8NCD3 748 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-208ENST00000443046 FBXL13Q8NEE6 735 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 OR14C36Q8NHC7 312 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 PTPRN2Q92932 1015 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 IPO9Q96P70 1041 aaKnown RBP14.92□□□□□ -0.02
HMGN1-208ENST00000443046 SEMA4CQ9C0C4 833 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 RAB20Q9NX57 234 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 SLCO3A1Q9UIG8 710 aa14.92□□□□□ -0.02
HMGN1-208ENST00000443046 TRIM38O00635 465 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 SIGLEC6O43699 453 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 MYL1P05976 194 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 KRT13P13646 458 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 UCNP55089 124 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 PCBP4P57723 403 aaKnown RBP14.91□□□□□ -0.02
HMGN1-208ENST00000443046 RPS24P62847 133 aaKnown RBP14.91□□□□□ -0.02
HMGN1-208ENST00000443046 MMS22LQ6ZRQ5 1243 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 STK40Q8N2I9 435 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 IRGQQ8WZA9 623 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 TTC9Q92623 222 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 LGMNQ99538 433 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 KDM4CQ9H3R0 1056 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 MMRN2Q9H8L6 949 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 STIM2Q9P246 746 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 PCDHB1Q9Y5F3 818 aa14.91□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3DA0A087WVF3 549 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3IA0A087WXS9 549 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3EA0A087X179 549 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3KA0A087X1G2 549 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3FA6NER0 549 aaPredicted RBP14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3LB9A6J9 549 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 O00370 1275 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3HP0C7X1 549 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 SETSIPP0DME0 302 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 MZF1P28698 734 aaPredicted RBP14.9□□□□□ -0.02
HMGN1-208ENST00000443046 NUDT1P36639 197 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 ME1P48163 572 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 PSMD8P48556 350 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TMPRSS3P57727 454 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 ECT2LQ008S8 904 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 ZCWPW2Q504Y3 356 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 SGO2Q562F6 1265 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3GQ6DHY5 549 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3CQ6IPX1 549 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 KDM7AQ6ZMT4 941 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 TBC1D3Q8IZP1 549 aaPredicted RBP14.9□□□□□ -0.02
HMGN1-208ENST00000443046 SIX6OS1Q8N1H7 587 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 UBR7Q8N806 425 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 UBA3Q8TBC4 463 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 SLC35F5Q8WV83 523 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 EEF2KMTQ96G04 330 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 FCRL2Q96LA5 508 aaPredicted RBP14.9□□□□□ -0.02
HMGN1-208ENST00000443046 HESX1Q9UBX0 185 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 CYTH4Q9UIA0 394 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 DMTF1Q9Y222 760 aa14.9□□□□□ -0.02
HMGN1-208ENST00000443046 B8ZZF3 427 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 SLC7A4O43246 635 aa14.89□□□□□ -0.03
HMGN1-208ENST00000443046 PLRG1O43660 514 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms