RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 SNX1Q13596 522 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 HLTFQ14527 1009 aaKnown RBP eCLIP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 SHHQ15465 462 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 PPM1LQ5SGD2 360 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 C9orf50Q5SZB4 431 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 AFMIDQ63HM1 303 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 HEATR6Q6AI08 1181 aaKnown RBP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 HIBCHQ6NVY1 386 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 DARS2Q6PI48 645 aaKnown RBP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 RHBDF2Q6PJF5 856 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 PPP1R21Q6ZMI0 780 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 TMC8Q8IU68 726 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 ZNF683Q8IZ20 524 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 CNPY4Q8N129 248 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 UMODL1-AS1Q8N2C9 162 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 PYROXD2Q8N2H3 581 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 RTL3Q8N8U3 475 aaKnown RBP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 GPR152Q8TDT2 470 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 SLC22A17Q8WUG5 538 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 TFB1MQ8WVM0 346 aaKnown RBP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 AUTS2Q8WXX7 1259 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 MRPS31Q92665 395 aaKnown RBP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 PRMT1Q99873 361 aaKnown RBP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 ARHGAP9Q9BRR9 750 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 C17orf80Q9BSJ5 609 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 TMEM121Q9BTD3 319 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 LRRC3Q9BY71 257 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 ZYG11BQ9C0D3 744 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 EPC1Q9H2F5 836 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 USP29Q9HBJ7 922 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 ANLNQ9NQW6 1124 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 ASAH2Q9NR71 780 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 TMEM248Q9NWD8 314 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 COX16Q9P0S2 106 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 SFMBT1Q9UHJ3 866 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 MSRAQ9UJ68 235 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 NFU1Q9UMS0 254 aa9.35□□□□□ -0.91
NR1I3-211ENST00000442691 MAGED2Q9UNF1 606 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-211ENST00000442691 PLXNA4Q9HCM2 1894 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 CXorf51AA0A1B0GTR3 108 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 SLC12A8A0AV02 714 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ESYT3A0FGR9 886 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ZSCAN5CA6NGD5 496 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 FAM72CH0Y354 149 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 H7C0C1 242 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 MSI1O43347 362 aaKnown RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 MFSD11O43934 449 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 PPFIA2O75334 1257 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 MYBL2P10244 700 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 TCF3P15923 654 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 AMPD1P23109 780 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 DNAJB1P25685 340 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 WEE1P30291 646 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 FDFT1P37268 417 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ATP5OP48047 213 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 YBEYP58557 167 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 GBE1Q04446 702 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 GPS2Q13227 327 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 GPM6BQ13491 265 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 MS4A13Q5J8X5 152 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 RABGAP1LQ5R372 815 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ARTNQ5T4W7 220 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 CFAP58Q5T655 872 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 TMCO4Q5TGY1 634 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 FAM72AQ5TYM5 149 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 PIK3R6Q5UE93 754 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 PLPP4Q5VZY2 271 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ARMC3Q5W041 872 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ALS2CLQ60I27 953 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 FAM72DQ6L9T8 149 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 TIGD7Q6NT04 549 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ZDHHC24Q6UX98 284 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 TRMT10CQ7L0Y3 403 aaKnown RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 TMC3Q7Z5M5 1100 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 CROCCP2Q86T23 111 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 TMEM150AQ86TG1 271 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 NLRP14Q86W24 1093 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 FAM72BQ86X60 149 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 FAM217AQ8IXS0 508 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 PPIL6Q8IXY8 311 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ZCCHC9Q8N567 271 aaKnown RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 FBXO25Q8TCJ0 367 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 IFT81Q8WYA0 676 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 OCSTAMPQ9BR26 566 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 KLF16Q9BXK1 252 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 FUT8Q9BYC5 575 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 NACA2Q9H009 215 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 KLC2Q9H0B6 622 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 CCSER2Q9H7U1 834 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 ALG13Q9NP73 1137 aaKnown RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 EIF2B3Q9NR50 452 aaKnown RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 HAUS2Q9NVX0 235 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 TRHDEQ9UKU6 1024 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
NR1I3-211ENST00000442691 HEY1Q9Y5J3 304 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 HS3ST4Q9Y661 456 aa9.34□□□□□ -0.91
NR1I3-211ENST00000442691 A0A0A0MRY4 1105 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms