RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 NHEJ1Q9H9Q4 299 aaPredicted RBP15.5■□□□□ 0.07
CSNK1E-210ENST00000442216 MYO1AQ9UBC5 1043 aa15.5■□□□□ 0.07
CSNK1E-210ENST00000442216 OR12D3Q9UGF7 316 aa15.5■□□□□ 0.07
CSNK1E-210ENST00000442216 TBC1D30Q9Y2I9 924 aa15.5■□□□□ 0.07
CSNK1E-210ENST00000442216 SPAG17Q6Q759 2223 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 EIF3CLB5ME19 914 aaKnown RBP15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 RNF8O76064 485 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 ALDH1A2O94788 518 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 DLDP09622 509 aaKnown RBP15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 HOXB2P14652 356 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 CDC25BP30305 580 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 GALCP54803 685 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 FSCBQ5H9T9 825 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 ARTNQ5T4W7 220 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 TMEM92Q6UXU6 159 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 SETD3Q86TU7 594 aaPredicted RBP15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 RASSF3Q86WH2 238 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 KDM1BQ8NB78 822 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 ACOX2Q99424 681 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 EIF3CQ99613 913 aaKnown RBP15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 TMPRSS4Q9NRS4 437 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 INTS6Q9UL03 887 aaKnown RBP15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 PLA2G4CQ9UP65 541 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 STON1Q9Y6Q2 735 aa15.49■□□□□ 0.07
CSNK1E-210ENST00000442216 NYNRINQ9P2P1 1898 aaKnown RBP15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 SRPRAP08240 638 aaKnown RBP15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 H2AFZP0C0S5 128 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 L1CAMP32004 1257 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 GGCXP38435 758 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 SULT2A1Q06520 285 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 ZNF252P-AS1Q0IIN9 211 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 PIGHQ14442 188 aaPredicted RBP15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 ZNF234Q14588 700 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 PLEKHG6Q3KR16 790 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 FUT11Q495W5 492 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 PITRM1Q5JRX3 1037 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 EFHC2Q5JST6 749 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 MANEALQ5VSG8 457 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 CXorf57Q6NSI4 855 aaKnown RBP15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 SCYL2Q6P3W7 929 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 H2AFVQ71UI9 128 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 CCDC185Q8N715 623 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 HHIPQ96QV1 700 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 PANX2Q96RD6 677 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 ZYG11BQ9C0D3 744 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 UVRAGQ9P2Y5 699 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 LCMT1Q9UIC8 334 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 FZD10Q9ULW2 581 aa15.48■□□□□ 0.07
CSNK1E-210ENST00000442216 A0A1W2PQF6 199 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 AXIN1O15169 862 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 ZBTB24O43167 697 aaPredicted RBP15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 SRGAP2O75044 1071 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 CNTN5O94779 1100 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 TMEM253P0C7T8 217 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 HTR7P34969 479 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 PCK1P35558 622 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 PLA2G5P39877 138 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 CSKP41240 450 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 IL12RB1P42701 662 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 FNTBP49356 437 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 VASPP50552 380 aaPredicted RBP15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 IRAK1P51617 712 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 STARD3Q14849 445 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 PTPRNQ16849 979 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 ALFQ53S48 1182 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 ZNF783Q6ZMS7 281 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 CIR1Q86X95 450 aaPredicted RBP15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 PSTKQ8IV42 348 aaKnown RBP15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 NIPA2Q8N8Q9 360 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 CTNNBL1Q8WYA6 563 aaPredicted RBP15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 FAM122AQ96E09 287 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 NUP85Q9BW27 656 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 TMEM245Q9H330 911 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 CD248Q9HCU0 757 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 ZDHHC4Q9NPG8 344 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 FAM86C1Q9NVL1 165 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 POLR3BQ9NW08 1133 aaPredicted RBP15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 CACNA2D2Q9NY47 1150 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 IP6K2Q9UHH9 426 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 INTUQ9ULD6 942 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 SNX10Q9Y5X0 201 aa15.47■□□□□ 0.07
CSNK1E-210ENST00000442216 WDFY4Q6ZS81 3184 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 LRIG2O94898 1065 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 FECHP22830 423 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 HOXC13P31276 330 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 ZNF135P52742 658 aaPredicted RBP15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 DMWDQ09019 674 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 C6orf118Q5T5N4 469 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 ERMARDQ5T6L9 678 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 SERPINA13PQ6UXR4 307 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 CCDC170Q8IYT3 715 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 APCDD1Q8J025 514 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 ARFGAP1Q8N6T3 406 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 SORCS1Q8WY21 1168 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 TBC1D31Q96DN5 1066 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 ARHGEF26Q96DR7 871 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 ALG14Q96F25 216 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 FEM1AQ9BSK4 669 aa15.46■□□□□ 0.07
CSNK1E-210ENST00000442216 TRIM7Q9C029 511 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms