RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 LRRC63Q05C16 580 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 PNOCQ13519 176 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 CAMK2BQ13554 666 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 MS4A13Q5J8X5 152 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 CHSY1Q86X52 802 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 CFAP52Q8N1V2 620 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 EID2Q8N6I1 236 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 PRICKLE1Q96MT3 831 aaPredicted RBP20.65■□□□□ 0.9
UBE2F-215ENST00000441728 GTPBP4Q9BZE4 634 aaKnown RBP20.65■□□□□ 0.9
UBE2F-215ENST00000441728 GOLPH3LQ9H4A5 285 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 SERGEFQ9UGK8 458 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 HOOK1Q9UJC3 728 aaKnown RBP20.65■□□□□ 0.9
UBE2F-215ENST00000441728 CABIN1Q9Y6J0 2220 aa20.65■□□□□ 0.9
UBE2F-215ENST00000441728 TBC1D3DA0A087WVF3 549 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3IA0A087WXS9 549 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3EA0A087X179 549 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3KA0A087X1G2 549 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3FA6NER0 549 aaPredicted RBP20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TTC34A8MYJ7 566 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3LB9A6J9 549 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 RRP8O43159 456 aaKnown RBP20.64■□□□□ 0.89
UBE2F-215ENST00000441728 C1SP09871 688 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3HP0C7X1 549 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 GOT1P17174 413 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 C5AR1P21730 350 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 FMO5P49326 533 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 CCR5P51681 352 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 NNTQ13423 1086 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 PKDCCQ504Y2 493 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 C9orf64Q5T6V5 341 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 ANKRD40Q6AI12 368 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3GQ6DHY5 549 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 NADSYN1Q6IA69 706 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3CQ6IPX1 549 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 PRPF39Q86UA1 669 aaKnown RBP20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TBC1D3Q8IZP1 549 aaPredicted RBP20.64■□□□□ 0.89
UBE2F-215ENST00000441728 LGI2Q8N0V4 545 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 PIP4K2CQ8TBX8 421 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 DQX1Q8TE96 717 aaKnown RBP20.64■□□□□ 0.89
UBE2F-215ENST00000441728 CLEC4CQ8WTT0 213 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 TFAP2BQ92481 460 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 NUCKS1Q9H1E3 243 aaKnown RBP20.64■□□□□ 0.89
UBE2F-215ENST00000441728 ADAMTS1Q9UHI8 967 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 SLC12A6Q9UHW9 1150 aa20.64■□□□□ 0.89
UBE2F-215ENST00000441728 FREM2Q5SZK8 3169 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 PLXNA2O75051 1894 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 MAGEC1O60732 1142 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 ACADSBP45954 432 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 SEMG2Q02383 582 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 DNAJC3Q13217 504 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 HS1BP3Q53T59 392 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 DCAF6Q58WW2 860 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 MMS22LQ6ZRQ5 1243 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 DSG4Q86SJ6 1040 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 STK40Q8N2I9 435 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 BAP1Q92560 729 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 SMARCE1Q969G3 411 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 SLC35C1Q96A29 364 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 MYO19Q96H55 970 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 FCRL2Q96LA5 508 aaPredicted RBP20.63■□□□□ 0.89
UBE2F-215ENST00000441728 MRGPRX3Q96LB0 322 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 GSDMAQ96QA5 445 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 ORAI3Q9BRQ5 295 aa20.63■□□□□ 0.89
UBE2F-215ENST00000441728 INTS6Q9UL03 887 aaKnown RBP20.63■□□□□ 0.89
UBE2F-215ENST00000441728 URB1O60287 2271 aaKnown RBP20.63■□□□□ 0.89
UBE2F-215ENST00000441728 APC2O95996 2303 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 KNL1Q8NG31 2342 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 FASNP49327 2511 aaKnown RBP20.62■□□□□ 0.89
UBE2F-215ENST00000441728 F5H5T6 163 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 PSMA7O14818 248 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 CTSOP43234 321 aaPredicted RBP20.62■□□□□ 0.89
UBE2F-215ENST00000441728 ARID5BQ14865 1188 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 RAP1GAP2Q684P5 730 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 UBR7Q8N806 425 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 ADAM32Q8TC27 787 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 RPL10LQ96L21 214 aaKnown RBP20.62■□□□□ 0.89
UBE2F-215ENST00000441728 UBL7Q96S82 380 aaPredicted RBP20.62■□□□□ 0.89
UBE2F-215ENST00000441728 NAALADL1Q9UQQ1 740 aa20.62■□□□□ 0.89
UBE2F-215ENST00000441728 TP53BP1Q12888 1972 aaPredicted RBP20.62■□□□□ 0.89
UBE2F-215ENST00000441728 TRIM49BA6NDI0 452 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 TLR4O00206 839 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 CBX4O00257 560 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 WNT1P04628 370 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 KRT5P13647 590 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 EPHA8P29322 1005 aaPredicted RBP20.61■□□□□ 0.89
UBE2F-215ENST00000441728 ADPRHP54922 357 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 SULT2A1Q06520 285 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 SLC12A1Q13621 1099 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 ELAVL3Q14576 367 aaKnown RBP20.61■□□□□ 0.89
UBE2F-215ENST00000441728 FSCBQ5H9T9 825 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 HES3Q5TGS1 186 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.61■□□□□ 0.89
UBE2F-215ENST00000441728 ATP6V0D2Q8N8Y2 350 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 SAP25Q8TEE9 199 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 LMLNQ96KR4 655 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 PPP1R9BQ96SB3 815 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 SLCO3A1Q9UIG8 710 aa20.61■□□□□ 0.89
UBE2F-215ENST00000441728 COL5A1P20908 1838 aaPredicted RBP20.6■□□□□ 0.89
UBE2F-215ENST00000441728 ITIH6Q6UXX5 1313 aa20.6■□□□□ 0.89
UBE2F-215ENST00000441728 MED7O43513 233 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms