RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SCNN1GP51170 649 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 CYP2J2P51589 502 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 UBASH3AP57075 661 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ETF1P62495 437 aaKnown RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TPM4P67936 248 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TLE3Q04726 772 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ADAM9Q13443 819 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TFDP1Q14186 410 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 MYBPC2Q14324 1141 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 SLBPQ14493 270 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 HSP90AA2PQ14568 343 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 NR1I3Q14994 352 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TPD52L1Q16890 204 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 FAM187BQ17R55 369 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 SEZ6Q53EL9 994 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 C2orf27AQ580R0 203 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 C1orf220Q5T0J3 134 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 FSTL4Q6MZW2 842 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ARMCX5Q6P1M9 558 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 CRELD2Q6UXH1 353 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 SRGAP1Q7Z6B7 1085 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 RASSF3Q86WH2 238 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 CDR2LQ86X02 465 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 CBWD2Q8IUF1 395 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 HID1Q8IV36 788 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TRIM59Q8IWR1 403 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ZBTB8OSQ8IWT0 167 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 SYCP3Q8IZU3 236 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 MFSD4AQ8N468 514 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 RPLP0P6Q8NHW5 317 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 CPB2Q96IY4 423 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ZNF512Q96ME7 567 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ZSWIM3Q96MP5 696 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 PPP1R9BQ96SB3 815 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 CDC6Q99741 560 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 MIPEPQ99797 713 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ACO2Q99798 780 aaKnown RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TUBGCP2Q9BSJ2 902 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TPSD1Q9BZJ3 242 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TRIM5Q9C035 493 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 SEMA4CQ9C0C4 833 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 RNF32Q9H0A6 362 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 C2orf40Q9H1Z8 148 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 VPS16Q9H269 839 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 PDZD7Q9H5P4 517 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 PTPRHQ9HD43 1115 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ASAH2Q9NR71 780 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TMEM74BQ9NUR3 256 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 PRMT7Q9NVM4 692 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 THG1LQ9NWX6 298 aaKnown RBP5.08□□□□□ -1.6
PTPN4-206ENST00000441089 OBP2AQ9NY56 170 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 HSPBP1Q9NZL4 362 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 PARP2Q9UGN5 583 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 EXOC7Q9UPT5 735 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 TNFSF13BQ9Y275 285 aa5.08□□□□□ -1.6
PTPN4-206ENST00000441089 ANKHD1Q8IWZ3 2542 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 LGALS16A8MUM7 142 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 HNRNPDLO14979 420 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 ADAM12O43184 909 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 EXOC3O60645 756 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CBFA2T3O75081 653 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 GJB3O75712 270 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 FGFR1OPO95684 399 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SERPINC1P01008 464 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 TRIM49P0CI25 452 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 TRIM49CP0CI26 452 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 HARSP12081 509 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MYL4P12829 197 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CR2P20023 1033 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CDK11BP21127 795 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 RPL13P26373 211 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 HOXA11P31270 313 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 HNF1BP35680 557 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 P2RY2P41231 377 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 TNFSF9P41273 254 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 CCR2P41597 374 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 PTGER3P43115 390 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MTIF2P46199 727 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 KLK7P49862 253 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 LIG4P49917 911 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 HK2P52789 917 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 EFNA5P52803 228 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 EPHA5P54756 1037 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 TMPRSS3P57727 454 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SNRPFP62306 86 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 DLG4P78352 724 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 DAB2P98082 770 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SEMG2Q02383 582 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SPAG1Q07617 926 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MCL1Q07820 350 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 PPP3CAQ08209 521 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 NCBP1Q09161 790 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 GRIK3Q13003 919 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 STRN3Q13033 797 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 PRPF4BQ13523 1007 aaKnown RBP5.07□□□□□ -1.6
PTPN4-206ENST00000441089 SEPT6Q14141 434 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 LY6DQ14210 128 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 NKG7Q16617 165 aa5.07□□□□□ -1.6
PTPN4-206ENST00000441089 MAN2A1Q16706 1144 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms