RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 F11P03951 625 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 NR2C2P49116 596 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 TUBP50607 506 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 SMAD3P84022 425 aaKnown RBP22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 KLHDC10Q6PID8 442 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 MICALCLQ6ZW33 695 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 NAT8LQ8N9F0 302 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 CCT8L2Q96SF2 557 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 FRMD8Q9BZ67 464 aaPredicted RBP22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 ZNF334Q9HCZ1 680 aaPredicted RBP22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 PAK5Q9P286 719 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 OR12D3Q9UGF7 316 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 HCFC2Q9Y5Z7 792 aa22.05■■□□□ 1.12
CDKN1C-204ENST00000440480 SLC12A8A0AV02 714 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 I6L893 689 aaPredicted RBP22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 CREB3O43889 395 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 RFPL2O75678 378 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 GDF10P55107 478 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 PDIA2Q13087 525 aaKnown RBP22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 TRIP4Q15650 581 aaPredicted RBP22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 ELMSAN1Q6PJG2 1045 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 BZW1Q7L1Q6 419 aaKnown RBP22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 TMEM150AQ86TG1 271 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 ZC3H18Q86VM9 953 aaKnown RBP22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 ZBED8Q8IZ13 594 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 PDIK1LQ8N165 341 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 CPT1BQ92523 772 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 SLC39A13Q96H72 371 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 HAPLN3Q96S86 360 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 CORO1BQ9BR76 489 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 PRO3102Q9H379 93 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 INTS9Q9NV88 658 aaKnown RBP22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 RCOR3Q9P2K3 495 aaPredicted RBP22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 ACTL7BQ9Y614 415 aa22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 COL4A4P53420 1690 aaPredicted RBP22.04■■□□□ 1.12
CDKN1C-204ENST00000440480 BCLAF3A2AJT9 711 aaKnown RBP22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 EPOPA6NHQ4 379 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 KCNU1A8MYU2 1149 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 COCHO43405 550 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 CHN1P15882 459 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 TSHRP16473 764 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 GOT1P17174 413 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 GABRR2P28476 465 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 XRCC4Q13426 336 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 C1orf228Q6PIY5 440 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 ADGRD2Q7Z7M1 963 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 EXOC3L1Q86VI1 746 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 CDKL3Q8IVW4 592 aaPredicted RBP22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 CSPG4P5Q96PW8 444 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 XPO6Q96QU8 1125 aaKnown RBP22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 IL21Q9HBE4 155 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 ASAH2Q9NR71 780 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 EXOC1LA0A1B0GW35 172 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 APOEP02649 317 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 HOXA9P31269 272 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 BASP1P80723 227 aaKnown RBP22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 TDRPQ86YL5 185 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 HS6ST3Q8IZP7 471 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 PCDH19Q8TAB3 1148 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 ZNF473Q8WTR7 871 aaKnown RBP22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 PYROXD1Q8WU10 500 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 SIK2Q9H0K1 926 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 OSBPL2Q9H1P3 480 aa22.03■■□□□ 1.12
CDKN1C-204ENST00000440480 C2orf78A6NCI8 922 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 H3BRJ5 948 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 RFXAPO00287 272 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 PAGE1O75459 146 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 MOCS2O96007 188 aaPredicted RBP22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 HNRNPA1P09651 372 aaKnown RBP eCLIP22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 COG7P83436 770 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 RING1Q06587 406 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 NPNTQ6UXI9 565 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 GAREM2Q75VX8 874 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 PQLC3Q8N755 202 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 ATP11CQ8NB49 1132 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 MRPS31Q92665 395 aaKnown RBP22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 RTP4Q96DX8 246 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 FCRL2Q96LA5 508 aaPredicted RBP22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 LRRC3Q9BY71 257 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 RNF38Q9H0F5 515 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 VPS37BQ9H9H4 285 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 XPO7Q9UIA9 1087 aaKnown RBP22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 HBS1LQ9Y450 684 aaKnown RBP22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 HEY1Q9Y5J3 304 aa22.02■■□□□ 1.12
CDKN1C-204ENST00000440480 PLXNA3P51805 1871 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 FAM72CH0Y354 149 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 EEF2KO00418 725 aaKnown RBP22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 XYLBO75191 536 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 OAS1P00973 400 aaKnown RBP22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 HMBSP08397 361 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 PTPN2P17706 415 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 NRIP1P48552 1158 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 ZNF135P52742 658 aaPredicted RBP22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 FAM72AQ5TYM5 149 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 FAM72DQ6L9T8 149 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 FOXR1Q6PIV2 292 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 FAM72BQ86X60 149 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 TMC8Q8IU68 726 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 GCNAQ96QF7 691 aa22.01■■□□□ 1.11
CDKN1C-204ENST00000440480 EPAS1Q99814 870 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms