RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ASLP04424 464 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 DLDP09622 509 aaKnown RBP12.17□□□□□ -0.46
HSPG2-206ENST00000439717 H2AFZP0C0S5 128 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 HOXB2P14652 356 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 POLR2EP19388 210 aaKnown RBP12.17□□□□□ -0.46
HSPG2-206ENST00000439717 CNR2P34972 360 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 GGCXP38435 758 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 ZNF252P-AS1Q0IIN9 211 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 PIGHQ14442 188 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-206ENST00000439717 FUT11Q495W5 492 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 PITRM1Q5JRX3 1037 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 EFHC2Q5JST6 749 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 MANEALQ5VSG8 457 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 CXorf57Q6NSI4 855 aaKnown RBP12.17□□□□□ -0.46
HSPG2-206ENST00000439717 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 H2AFVQ71UI9 128 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 SETD3Q86TU7 594 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-206ENST00000439717 CIR1Q86X95 450 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-206ENST00000439717 NIPA2Q8N8Q9 360 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 KDM1BQ8NB78 822 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 CTNNBL1Q8WYA6 563 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-206ENST00000439717 HHIPQ96QV1 700 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 ACOX2Q99424 681 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 NUP85Q9BW27 656 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 ZYG11BQ9C0D3 744 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 ZDHHC4Q9NPG8 344 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 IMPACTQ9P2X3 320 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 UVRAGQ9P2Y5 699 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 LCMT1Q9UIC8 334 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 FZD10Q9ULW2 581 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 SNX10Q9Y5X0 201 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 STON1Q9Y6Q2 735 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
HSPG2-206ENST00000439717 PROB1E7EW31 1015 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 ZBTB24O43167 697 aaPredicted RBP12.16□□□□□ -0.46
HSPG2-206ENST00000439717 CNTN5O94779 1100 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 SRPRAP08240 638 aaKnown RBP12.16□□□□□ -0.46
HSPG2-206ENST00000439717 TMEM253P0C7T8 217 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 L1CAMP32004 1257 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 HTR7P34969 479 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 PCK1P35558 622 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 CSKP41240 450 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 IL12RB1P42701 662 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 FNTBP49356 437 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 IRAK1P51617 712 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 SULT2A1Q06520 285 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 DMWDQ09019 674 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 ZNF234Q14588 700 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 PLEKHG6Q3KR16 790 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 ALFQ53S48 1182 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 ARTNQ5T4W7 220 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 C6orf118Q5T5N4 469 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 ZNF783Q6ZMS7 281 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.16□□□□□ -0.46
HSPG2-206ENST00000439717 RASSF3Q86WH2 238 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 PSTKQ8IV42 348 aaKnown RBP12.16□□□□□ -0.46
HSPG2-206ENST00000439717 CCDC170Q8IYT3 715 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 TBC1D31Q96DN5 1066 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 ARHGEF26Q96DR7 871 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
HSPG2-206ENST00000439717 TRIM7Q9C029 511 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 POLR3BQ9NW08 1133 aaPredicted RBP12.16□□□□□ -0.46
HSPG2-206ENST00000439717 CACNA2D2Q9NY47 1150 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 IP6K2Q9UHH9 426 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 ANAPC7Q9UJX3 599 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 INTS6Q9UL03 887 aaKnown RBP12.16□□□□□ -0.46
HSPG2-206ENST00000439717 INTUQ9ULD6 942 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 CACNA1IQ9P0X4 2223 aa12.16□□□□□ -0.46
HSPG2-206ENST00000439717 A0A1W2PQF6 199 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 MYO1FO00160 1098 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 AXIN1O15169 862 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 PRPSAP2O60256 369 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 SYNCRIPO60506 623 aaKnown RBP12.15□□□□□ -0.46
HSPG2-206ENST00000439717 LRCH4O75427 683 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 LRIG2O94898 1065 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 RHOCP08134 193 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 RHOQP17081 205 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 FECHP22830 423 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 MIPP30301 263 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 OR1E1P30953 314 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 WASP42768 502 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-206ENST00000439717 ST8SIA6P61647 398 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 ECT2LQ008S8 904 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 STARD3Q14849 445 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 PTPRNQ16849 979 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
HSPG2-206ENST00000439717 ERMARDQ5T6L9 678 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 RNF219Q5W0B1 726 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-206ENST00000439717 HEATR6Q6AI08 1181 aaKnown RBP12.15□□□□□ -0.46
HSPG2-206ENST00000439717 SERPINA13PQ6UXR4 307 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 TMTC1Q8IUR5 882 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 APCDD1Q8J025 514 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 ARFGAP1Q8N6T3 406 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 ZNF564Q8TBZ8 553 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-206ENST00000439717 CYB5D2Q8WUJ1 264 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 SORCS1Q8WY21 1168 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 EPAS1Q99814 870 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 FEM1AQ9BSK4 669 aa12.15□□□□□ -0.46
HSPG2-206ENST00000439717 PACSIN1Q9BY11 444 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms