RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 MBLAC2Q68D91 279 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 FAM72DQ6L9T8 149 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 CXorf57Q6NSI4 855 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 TMEM92Q6UXU6 159 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 TRMT11Q7Z4G4 463 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 FAM72BQ86X60 149 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 CHPFQ8IZ52 775 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 PYROXD2Q8N2H3 581 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 ZNF564Q8TBZ8 553 aaPredicted RBP20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 CYB5D2Q8WUJ1 264 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 HHIPQ96QV1 700 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 CACNA2D2Q9NY47 1150 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 CTTNBP2NLQ9P2B4 639 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 IMPACTQ9P2X3 320 aa20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 THAP10Q9P2Z0 257 aaPredicted RBP20.06■□□□□ 0.8
SEMA3B-206ENST00000439487 SDK1Q7Z5N4 2213 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 WASH3PC4AMC7 463 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 TIMM44O43615 452 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 CLDN11O75508 207 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 POLR2EP19388 210 aaKnown RBP20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 MIPP30301 263 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 NTSR1P30989 418 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 CSKP41240 450 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 NRG1Q02297 640 aaPredicted RBP20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 EIF4HQ15056 248 aaKnown RBP20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 ZNF528Q3MIS6 628 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 PITRM1Q5JRX3 1037 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 EFHC2Q5JST6 749 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 APCDD1Q8J025 514 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 OR52K2Q8NGK3 314 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 ATOH1Q92858 354 aaPredicted RBP20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 ERLEC1Q96DZ1 483 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 PEBP4Q96S96 227 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 FAM86C1Q9NVL1 165 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 GPATCH2LQ9NWQ4 482 aa20.05■□□□□ 0.8
SEMA3B-206ENST00000439487 LRCH4O75427 683 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 FECHP22830 423 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 MZF1P28698 734 aaPredicted RBP20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 PXNP49023 591 aaPredicted RBP20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 PIGHQ14442 188 aaPredicted RBP20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 ZNF234Q14588 700 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 CRY1Q16526 586 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 MANEALQ5VSG8 457 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 HEATR6Q6AI08 1181 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 SDE2Q6IQ49 451 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 RWDD4Q6NW29 188 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 TFAP2DQ7Z6R9 452 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 TMTC1Q8IUR5 882 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 CCDC170Q8IYT3 715 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 TTC17Q96AE7 1141 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 ZYG11BQ9C0D3 744 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 UVRAGQ9P2Y5 699 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 PPARGC1AQ9UBK2 798 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 IP6K2Q9UHH9 426 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 STON1Q9Y6Q2 735 aa20.04■□□□□ 0.8
SEMA3B-206ENST00000439487 SOWAHDA6NJG2 315 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 MYO1FO00160 1098 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 LRIG2O94898 1065 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 MOCS3O95396 460 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 RHOCP08134 193 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 HOXB2P14652 356 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 CYLC1P35663 651 aaPredicted RBP20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 IL12RB1P42701 662 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 FNTBP49356 437 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 AIF1P55008 147 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 ACAP1Q15027 740 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 PLEKHG6Q3KR16 790 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 TSTD1Q8NFU3 115 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 TBC1D31Q96DN5 1066 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 SNRNP25Q9BV90 132 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 IRF2BPLQ9H1B7 796 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 OSGEPQ9NPF4 335 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 AP4E1Q9UPM8 1137 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 TBC1D30Q9Y2I9 924 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 RAD54BQ9Y620 910 aa20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 NYNRINQ9P2P1 1898 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-206ENST00000439487 ABCA7Q8IZY2 2146 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 CREB3O43889 395 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 PRPSAP2O60256 369 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 LCA5LO95447 670 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 ATP5BP06576 529 aaKnown RBP20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 TCF4P15884 667 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 L1CAMP32004 1257 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 PCK1P35558 622 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 CTSOP43234 321 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 MAGEA1P43355 309 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 PLK1P53350 603 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 OXCT1P55809 520 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 SLC12A1Q13621 1099 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 CA9Q16790 459 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 PTPRNQ16849 979 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 FNDC3BQ53EP0 1204 aaKnown RBP20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 ERMARDQ5T6L9 678 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 RNF219Q5W0B1 726 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 CYP4V2Q6ZWL3 525 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 CPNE8Q86YQ8 564 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 CAMKK1Q8N5S9 505 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 NIPA2Q8N8Q9 360 aa20.02■□□□□ 0.8
SEMA3B-206ENST00000439487 SLC35G2Q8TBE7 412 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms