RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 C6orf203Q9P0P8 240 aaPredicted RBP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 STK39Q9UEW8 545 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 TRIP11Q15643 1979 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 C7orf72A4D263 438 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 STRNO43815 780 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 DKC1O60832 514 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 GLRA3O75311 464 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 HSPA4LO95757 839 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 LTFP02788 710 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 CCDC166P0CW27 439 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 MGAT1P26572 445 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 PIK3R1P27986 724 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 TYK2P29597 1187 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 DCTN2Q13561 401 aaKnown RBP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 TFDP2Q14188 446 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 LDLRAD1Q5T700 205 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 FAM183BPQ6ZVS7 135 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 SLC4A11Q8NBS3 891 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 REPS2Q8NFH8 660 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 R3HDMLQ9H3Y0 253 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 PCDH18Q9HCL0 1135 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 CTDP1Q9Y5B0 961 aaPredicted RBP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 COL11A1P12107 1806 aaPredicted RBP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 MGAMO43451 1857 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 CROCCQ5TZA2 2017 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 RNASEH2AO75792 299 aaKnown RBP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 CELF2O95319 508 aaKnown RBP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 GJB1P08034 283 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 ARSAP15289 507 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 GPD1P21695 349 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 MPSTP25325 297 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 NAMPTP43490 491 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF143P52747 638 aaPredicted RBP13.88□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF423Q2M1K9 1284 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 AHI1Q8N157 1196 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 NUP93Q8N1F7 819 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 RTKNQ9BST9 563 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 RNF146Q9NTX7 359 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 MTMR10Q9NXD2 777 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 RAB26Q9ULW5 256 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 RNF11Q9Y3C5 154 aa13.88□□□□□ -0.19
PCNX3-202ENST00000439247 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 JUNP05412 331 aaKnown RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 ATP5BP06576 529 aaKnown RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 HOXC6P09630 235 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 CPA3P15088 417 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 CCND2P30279 289 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 ARL2P36404 184 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 SERPINB9P50453 376 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 ANKDD1AQ495B1 522 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 XKR3Q5GH77 459 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 EPGNQ6UW88 154 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 TICAM1Q8IUC6 712 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 MCRS1Q96EZ8 462 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 SNRNP25Q9BV90 132 aaKnown RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF696Q9H7X3 374 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF214Q9UL59 606 aaPredicted RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 GMEB1Q9Y692 573 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 A0A0G2JLL6 359 aaPredicted RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 C2CD4BA6NLJ0 364 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 CYP3A5P20815 502 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 SERPINB8P50452 374 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 CCDC14Q49A88 953 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 FAM47CQ5HY64 1035 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 CST9Q5W186 159 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 TIFABQ6ZNK6 161 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 PRRT2Q7Z6L0 340 aaPredicted RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 C12orf29Q8N999 325 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 ACVR1CQ8NER5 493 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 ATP6V1E2Q96A05 226 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 ZFRQ96KR1 1074 aaKnown RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 CDH19Q9H159 772 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 Q9H521 79 aa13.87□□□□□ -0.19
PCNX3-202ENST00000439247 DHX35Q9H5Z1 703 aaKnown RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
PCNX3-202ENST00000439247 PLOD2O00469 737 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 PIGRP01833 764 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 THRAP10827 490 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 GPD2P43304 727 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 HARS2P49590 506 aaKnown RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 SH3BGRP55822 239 aaPredicted RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 NIPAL4Q0D2K0 466 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 ITGA7Q13683 1181 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 Q3C1V9 767 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 IL23RQ5VWK5 629 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 KCNT2Q6UVM3 1135 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 TDRD5Q8NAT2 981 aaKnown RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 SLC7A3Q8WY07 619 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 TMA16Q96EY4 203 aaKnown RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 HEXIM2Q96MH2 286 aaKnown RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 NPAS2Q99743 824 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 CCT7Q99832 543 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 SLC4A5Q9BY07 1137 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 LHX5Q9H2C1 402 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 CAAP1Q9H8G2 361 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 TCF7L2Q9NQB0 619 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 H0YCG3 227 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 PDGFRBP09619 1106 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 ENTPD1P49961 510 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 PTPN11Q06124 597 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms