RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CIPCQ9C0C6 399 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 DHX35Q9H5Z1 703 aaKnown RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 POLR3BQ9NW08 1133 aaPredicted RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 HCN2Q9UL51 889 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 MYO18AQ92614 2054 aaKnown RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 WDFY4Q6ZS81 3184 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 DRGXA6NNA5 263 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 CREB3O43889 395 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 CLDN11O75508 207 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 KLF8O95600 359 aaPredicted RBP16.63■□□□□ 0.25
SNRPB-202ENST00000438552 CSKP41240 450 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 CDH4P55283 916 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 SEMA3BQ13214 749 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 ERMARDQ5T6L9 678 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 KIAA0907Q7Z7F0 614 aaPredicted RBP16.63■□□□□ 0.25
SNRPB-202ENST00000438552 AHI1Q8N157 1196 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 CCDC33Q8N5R6 958 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 ALLCQ8N6M5 410 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 ZNF513Q8N8E2 541 aaPredicted RBP16.63■□□□□ 0.25
SNRPB-202ENST00000438552 ZNF557Q8N988 423 aaPredicted RBP16.63■□□□□ 0.25
SNRPB-202ENST00000438552 WFIKKN2Q8TEU8 576 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 KCTD15Q96SI1 283 aaPredicted RBP16.63■□□□□ 0.25
SNRPB-202ENST00000438552 NCAPGQ9BPX3 1015 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 IER2Q9BTL4 223 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 ZYG11BQ9C0D3 744 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 PPARGC1AQ9UBK2 798 aaKnown RBP16.63■□□□□ 0.25
SNRPB-202ENST00000438552 INTS6Q9UL03 887 aaKnown RBP16.63■□□□□ 0.25
SNRPB-202ENST00000438552 CHD5Q8TDI0 1954 aa16.63■□□□□ 0.25
SNRPB-202ENST00000438552 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.62■□□□□ 0.25
SNRPB-202ENST00000438552 MZF1P28698 734 aaPredicted RBP16.62■□□□□ 0.25
SNRPB-202ENST00000438552 L1CAMP32004 1257 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 MAN1A1P33908 653 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 NOP2P46087 812 aaKnown RBP16.62■□□□□ 0.25
SNRPB-202ENST00000438552 VAV2P52735 878 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 MRPS21P82921 87 aaKnown RBP16.62■□□□□ 0.25
SNRPB-202ENST00000438552 SATB1Q01826 763 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 ZNF177Q13360 481 aaPredicted RBP16.62■□□□□ 0.25
SNRPB-202ENST00000438552 EIF4HQ15056 248 aaKnown RBP16.62■□□□□ 0.25
SNRPB-202ENST00000438552 TCEAL1Q15170 157 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 PITRM1Q5JRX3 1037 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 KCNT1Q5JUK3 1230 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 MBLAC2Q68D91 279 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 KIAA1328Q86T90 577 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 ADIPOR2Q86V24 386 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 LRRC8AQ8IWT6 810 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 APCDD1Q8J025 514 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 SPEM1Q8N4L4 309 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 IL17RCQ8NAC3 791 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 HSPH1Q92598 858 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 ACOX2Q99424 681 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 EPAS1Q99814 870 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNRPB-202ENST00000438552 ZNF212Q9UDV6 495 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 LCMT1Q9UIC8 334 aa16.62■□□□□ 0.25
SNRPB-202ENST00000438552 CACNA1IQ9P0X4 2223 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 A0A0A6YYK5 440 aaPredicted RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 A0A0U1RQJ8 604 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 CHURC1-FNTBB4DL54 471 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 GALR2O43603 387 aaPredicted RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 RHOCP08134 193 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 EPHB2P29323 1055 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 HOXC13P31276 330 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 WASP42768 502 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 TAS2R40P59535 323 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 TPI1P60174 286 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 CCZ1BP86790 482 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 CCZ1P86791 482 aaPredicted RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 PLEKHG6Q3KR16 790 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 PPP6R3Q5H9R7 873 aaPredicted RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 RNF219Q5W0B1 726 aaPredicted RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 NLRP14Q86W24 1093 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 C1orf210Q8IVY1 113 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 TXNDC5Q8NBS9 432 aaKnown RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 CCDC26Q8TAB7 109 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 CYB5D2Q8WUJ1 264 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 ATRIPQ8WXE1 791 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 ANP32BQ92688 251 aaKnown RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 ACDQ96AP0 544 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 LACRTQ9GZZ8 138 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 GOLPH3Q9H4A6 298 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 PRMT8Q9NR22 394 aaPredicted RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 NDFIP2Q9NV92 336 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 KLHL11Q9NVR0 708 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 ELOVL2Q9NXB9 296 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 CACNA2D2Q9NY47 1150 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 KIAA1522Q9P206 1035 aaPredicted RBP16.61■□□□□ 0.25
SNRPB-202ENST00000438552 SALL4Q9UJQ4 1053 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 MMP17Q9ULZ9 603 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 TBC1D30Q9Y2I9 924 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 STARD13Q9Y3M8 1113 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 CKAP5Q14008 2032 aa16.61■□□□□ 0.25
SNRPB-202ENST00000438552 SGK1O00141 431 aa16.6■□□□□ 0.25
SNRPB-202ENST00000438552 EEF2KO00418 725 aaKnown RBP16.6■□□□□ 0.25
SNRPB-202ENST00000438552 ARHGAP6O43182 974 aa16.6■□□□□ 0.25
SNRPB-202ENST00000438552 LAMTOR5O43504 91 aa16.6■□□□□ 0.25
SNRPB-202ENST00000438552 BUB1BO60566 1050 aaPredicted RBP16.6■□□□□ 0.25
SNRPB-202ENST00000438552 ADAM23O75077 832 aa16.6■□□□□ 0.25
SNRPB-202ENST00000438552 RARAP10276 462 aa16.6■□□□□ 0.25
SNRPB-202ENST00000438552 RHOQP17081 205 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms