RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GAREM1Q9H706 876 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 ST7Q9NRC1 585 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 STIM2Q9P246 746 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 SFMBT1Q9UHJ3 866 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 WASF3Q9UPY6 502 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 NCKAP1Q9Y2A7 1128 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 COQ4Q9Y3A0 265 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 MYO18AQ92614 2054 aaKnown RBP8.07□□□□□ -1.12
VPS50-204ENST00000438395 MYOFQ9NZM1 2061 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 AKAP13Q12802 2813 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 ACACAQ13085 2346 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 BICDL2A1A5D9 508 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 METTL12A8MUP2 240 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 CAPN9O14815 690 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 FLRT2O43155 660 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 TBL1XO60907 577 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 SEMA4FO95754 770 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 MOCS2O96007 188 aaPredicted RBP8.06□□□□□ -1.12
VPS50-204ENST00000438395 IGLV3-19P01714 112 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 APOEP02649 317 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 LTFP02788 710 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 ASLP04424 464 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 KRT5P13647 590 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 BRD2P25440 801 aaKnown RBP8.06□□□□□ -1.12
VPS50-204ENST00000438395 HLA-FP30511 346 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 FMO5P49326 533 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 C21orf59P57076 290 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 DAOAP59103 153 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 RING1Q06587 406 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 COBLL1Q53SF7 1204 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 MPP7Q5T2T1 576 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 ANKRD40Q6AI12 368 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 MSANTD2Q6P1R3 559 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 RFWD3Q6PCD5 774 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 FMR1NBQ8N0W7 255 aaPredicted RBP8.06□□□□□ -1.12
VPS50-204ENST00000438395 SCML4Q8N228 414 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 ZNF366Q8N895 744 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 RBBP8NLQ8NC74 664 aaPredicted RBP8.06□□□□□ -1.12
VPS50-204ENST00000438395 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 SLC35C1Q96A29 364 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 SERPINB11Q96P15 392 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 MIS12Q9H081 205 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 TM7SF3Q9NS93 570 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 SUN2Q9UH99 717 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 FNDC3AQ9Y2H6 1198 aaKnown RBP8.06□□□□□ -1.12
VPS50-204ENST00000438395 ZDHHC9Q9Y397 364 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 PI4KAP42356 2102 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 MYH10P35580 1976 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 APC2O95996 2303 aa8.06□□□□□ -1.12
VPS50-204ENST00000438395 FASNP49327 2511 aaKnown RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 A0A1B0GVT2 93 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 TRIM49BA6NDI0 452 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 FAM47DPA6NHR8 397 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 SRRM3A6NNA2 597 aaPredicted RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 KCNJ18B7U540 433 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 PIK3R2O00459 728 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 P4HA2O15460 535 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 MED7O43513 233 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 ACSL4O60488 711 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 ZNF883P0CG24 379 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 NNMTP40261 264 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 GRK6P43250 576 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 GRIA4P48058 902 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 CSNK1EP49674 416 aaKnown RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 CCT8P50990 548 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 COPAP53621 1224 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 FAM193AP78312 1265 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 CNGA2Q16280 664 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 HLA-BQ31612 363 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 CCDC157Q569K6 752 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 RAB44Q7Z6P3 723 aaPredicted RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 CARNMT1Q8N4J0 409 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS50-204ENST00000438395 PNPLA1Q8N8W4 532 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 RHBDD1Q8TEB9 315 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 ADAMTS14Q8WXS8 1223 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 P2RY11Q96G91 374 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 DHTKD1Q96HY7 919 aaPredicted RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 HSFY1Q96LI6 401 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 ACE2Q9BYF1 805 aaPredicted RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 CCDC86Q9H6F5 360 aaKnown RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 C6orf106Q9H6K1 298 aaPredicted RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 SGK2Q9HBY8 427 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 TJP2Q9UDY2 1190 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 SLC12A6Q9UHW9 1150 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 STOML2Q9UJZ1 356 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 PCOLCE2Q9UKZ9 415 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 CLEC4EQ9ULY5 219 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 SCML1Q9UN30 329 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS50-204ENST00000438395 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.05□□□□□ -1.12
VPS50-204ENST00000438395 PCDHGB2Q9Y5G2 931 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 PLXND1Q9Y4D7 1925 aa8.05□□□□□ -1.12
VPS50-204ENST00000438395 KNL1Q8NG31 2342 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 LRRC72A6NJI9 287 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 GJB3O75712 270 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 FGFR1OPO95684 399 aaKnown RBP8.04□□□□□ -1.12
VPS50-204ENST00000438395 GNA14O95837 355 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms