RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 TNNC1P63316 161 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 EFEMP1Q12805 493 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 GNL2Q13823 731 aaKnown RBP9.5□□□□□ -0.89
RPE-210ENST00000438204 SPIDRQ14159 915 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 MCM6Q14566 821 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 STAT4Q14765 748 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 POSTNQ15063 836 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 C1QL3Q5VWW1 255 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 CAPRIN2Q6IMN6 1127 aaKnown RBP9.5□□□□□ -0.89
RPE-210ENST00000438204 KLHDC10Q6PID8 442 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 SCARA5Q6ZMJ2 495 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 SND1Q7KZF4 910 aaKnown RBP eCLIP9.5□□□□□ -0.89
RPE-210ENST00000438204 RSRC2Q7L4I2 434 aaKnown RBP9.5□□□□□ -0.89
RPE-210ENST00000438204 RAB11FIP2Q7L804 512 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 SCD5Q86SK9 330 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 AHI1Q8N157 1196 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 SLC22A18ASQ8N1D0 253 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 CPXM2Q8N436 756 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.5□□□□□ -0.89
RPE-210ENST00000438204 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 C9orf43Q8TAL5 461 aaPredicted RBP9.5□□□□□ -0.89
RPE-210ENST00000438204 KLK6Q92876 244 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 NOX5Q96PH1 765 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 SLC12A9Q9BXP2 914 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 FOXP3Q9BZS1 431 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 USP29Q9HBJ7 922 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 EVA1BQ9NVM1 165 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 KLHL11Q9NVR0 708 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 SUN2Q9UH99 717 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 SCML2Q9UQR0 700 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 ZNF510Q9Y2H8 683 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 CSMD2Q7Z408 3487 aa9.5□□□□□ -0.89
RPE-210ENST00000438204 TTC34A8MYJ7 566 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 SCAMP1O15126 338 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 RNASEH1O60930 286 aaKnown RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 PRPF6O94906 941 aaKnown RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 NR1D1P20393 614 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 ETV5P41161 510 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 OVGP1Q12889 678 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 ME3Q16798 604 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 DEFB133Q30KQ1 61 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 HNRNPA1L2Q32P51 320 aaKnown RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 C9orf64Q5T6V5 341 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 ZCCHC8Q6NZY4 707 aaKnown RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 DTHD1Q6ZMT9 781 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 MAMDC2Q7Z304 686 aaPredicted RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 KIAA0907Q7Z7F0 614 aaPredicted RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 ZC3H18Q86VM9 953 aaKnown RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 FAM217AQ8IXS0 508 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 STK40Q8N2I9 435 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 ZNF548Q8NEK5 533 aaPredicted RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 SLC2A14Q8TDB8 520 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 PPP1R13BQ96KQ4 1090 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 TM6SF1Q9BZW5 370 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 FAM49BQ9NUQ9 324 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 DNAJC28Q9NX36 388 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 TBC1D7Q9P0N9 293 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 SEPT10Q9P0V9 454 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 HMGXB4Q9UGU5 601 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 TUBD1Q9UJT1 453 aa9.49□□□□□ -0.89
RPE-210ENST00000438204 NOL7Q9UMY1 257 aaKnown RBP9.49□□□□□ -0.89
RPE-210ENST00000438204 SVILO95425 2214 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 APCP25054 2843 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 TRPM6Q9BX84 2022 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 EME2A4GXA9 379 aaPredicted RBP9.48□□□□□ -0.89
RPE-210ENST00000438204 WIPF3A6NGB9 483 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 HHLA1C9JL84 531 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 CST3P01034 146 aaPredicted RBP9.48□□□□□ -0.89
RPE-210ENST00000438204 PRKCGP05129 697 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 ATP5BP06576 529 aaKnown RBP9.48□□□□□ -0.89
RPE-210ENST00000438204 POLR2EP19388 210 aaKnown RBP9.48□□□□□ -0.89
RPE-210ENST00000438204 ADORA2BP29275 332 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
RPE-210ENST00000438204 HARS2P49590 506 aaKnown RBP9.48□□□□□ -0.89
RPE-210ENST00000438204 NUMBP49757 651 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 CASP5P51878 434 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 CLDN2P57739 230 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 PDE4CQ08493 712 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 WDR72Q3MJ13 1102 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 OR6B2Q6IFH4 312 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 DSG4Q86SJ6 1040 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 ACOT1Q86TX2 421 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 CBWD2Q8IUF1 395 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 TMEM145Q8NBT3 493 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
RPE-210ENST00000438204 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 FAM129BQ96TA1 746 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 CCDC3Q9BQI4 270 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 DUSP23Q9BVJ7 150 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 DCLK3Q9C098 648 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 SDCBP2Q9H190 292 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 FOXP1Q9H334 677 aaPredicted RBP9.48□□□□□ -0.89
RPE-210ENST00000438204 ST6GALNAC4Q9H4F1 302 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 PREBQ9HCU5 417 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 BLOC1S4Q9NUP1 217 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 DMTF1Q9Y222 760 aa9.48□□□□□ -0.89
RPE-210ENST00000438204 SPG11Q96JI7 2443 aa9.47□□□□□ -0.89
RPE-210ENST00000438204 TNRC6AQ8NDV7 1962 aaKnown RBP9.47□□□□□ -0.89
RPE-210ENST00000438204 SLC12A8A0AV02 714 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms