RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MAGP20916 626 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CRHR1P34998 444 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TCF7P36402 384 aaPredicted RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CACNB3P54284 484 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 ABCE1P61221 599 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PTK2BQ14289 1009 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 GPR162Q16538 588 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CES3Q6UWW8 571 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PDZD8Q8NEN9 1154 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CDH19Q9H159 772 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 WARS2Q9UGM6 360 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 MYO18AQ92614 2054 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 ALS2Q96Q42 1657 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TRIM64CA6NLI5 447 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF839A8K0R7 811 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 HLA-DRAP01903 254 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 KRT19P08727 400 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 HDCP19113 662 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ACOT2P49753 483 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 RHBDL3P58872 404 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 SCARA3Q6AZY7 606 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 DCLRE1AQ6PJP8 1040 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ARCQ7LC44 396 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 PGLYRP2Q96PD5 576 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 STN1Q9H668 368 aaKnown RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 EMCNQ9ULC0 261 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 TIMM22Q9Y584 194 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 KIF13BQ9NQT8 1826 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 NOTOA8MTQ0 251 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 PLIN3O60664 434 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 APOEP02649 317 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 TYK2P29597 1187 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 EPHX2P34913 555 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 PGGT1BP53609 377 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 MLLT10P55197 1068 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 PIGGQ5H8A4 983 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 PPP2R2DQ66LE6 453 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 CARM1Q86X55 608 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 FBXL20Q96IG2 436 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 HNRNPDLO14979 420 aaKnown RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 GRIA3P42263 894 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 RAD23AP54725 363 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ROR1Q01973 937 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 PCLAFQ15004 111 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 MOGQ16653 247 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 SEZ6Q53EL9 994 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 KCTD8Q6ZWB6 473 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 DSG4Q86SJ6 1040 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 HEATR4Q86WZ0 1026 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 PCYOX1LQ8NBM8 494 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ITPKCQ96DU7 683 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 VCPIP1Q96JH7 1222 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 GLT8D2Q9H1C3 349 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 DDX4Q9NQI0 724 aaKnown RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ANKRD36CQ5JPF3 1778 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 RGSL1A5PLK6 1076 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 SOBPA7XYQ1 873 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ZBBXA8MT70 800 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 KPNA4O00629 521 aaPredicted RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 B4GAT1O43505 415 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 GUCY1B2O75343 617 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 SULT1C4O75897 302 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 GSRP00390 522 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ERBB2P04626 1255 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 CHRNGP07510 517 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 MPSTP25325 297 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 SCNN1DP51172 638 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 TXNL4AP83876 142 aaKnown RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 FAM47CQ5HY64 1035 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 CBR4Q8N4T8 237 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ACDQ96AP0 544 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 SOCS2O14508 198 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 SPAG6O75602 509 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 VAPBO95292 243 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ACAT1P24752 427 aaKnown RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 GTF2A2P52657 109 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 JOSD2Q8TAC2 188 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 HGH1Q9BTY7 390 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 MRPL46Q9H2W6 279 aaKnown RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 DHX35Q9H5Z1 703 aaKnown RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 POPDC2Q9HBU9 364 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF229Q9UJW7 825 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 NFASCO94856 1347 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 RREB1Q92766 1687 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 ANKRD34BA5PLL1 514 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 AP3B1O00203 1094 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 PSMD10O75832 226 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 CLCQ05315 142 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 TDRD5Q8NAT2 981 aaKnown RBP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 USP33Q8TEY7 942 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.62□□□□□ -1.19
CPSF6-202ENST00000435070 MOSPD1Q9UJG1 213 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 UBE4BO95155 1302 aa7.62□□□□□ -1.19
CPSF6-202ENST00000435070 CCNA2P20248 432 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 GABRB2P47870 512 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 SESN2P58004 480 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 IFRD2Q12894 506 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-202ENST00000435070 NFATC3Q12968 1075 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 ITPK1Q13572 414 aa7.61□□□□□ -1.19
CPSF6-202ENST00000435070 CLPPQ16740 277 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms