RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MRPS6P82932 125 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 ZNF33AQ06730 810 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 NAA25Q14CX7 972 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 FAM182AQ5T1J6 154 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 TEDDM1Q5T9Z0 273 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 NET1Q7Z628 596 aaPredicted RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 ALYREFQ86V81 257 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 LMNTD2Q8IXW0 634 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 TTC8Q8TAM2 541 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 PIWIL2Q8TC59 973 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 HDAC11Q96DB2 347 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 NAF1Q96HR8 494 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 ZNF570Q96NI8 536 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 CCDC106Q9BWC9 280 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 GBA3Q9H227 469 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 C1orf21Q9H246 121 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 WDR6Q9NNW5 1121 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 CRTAC1Q9NQ79 661 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 DNAJC28Q9NX36 388 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 EMCNQ9ULC0 261 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 APOBEC2Q9Y235 224 aaKnown RBP10.68□□□□□ -0.7
CD44-210ENST00000434472 RPS6KL1Q9Y6S9 549 aa10.68□□□□□ -0.7
CD44-210ENST00000434472 F5H423 210 aaPredicted RBP10.67□□□□□ -0.7
CD44-210ENST00000434472 NRP1O14786 923 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 TIMM44O43615 452 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 ENTPD5O75356 428 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 FYNP06241 537 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 APOA4P06727 396 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 ENO1P06733 434 aaKnown RBP10.67□□□□□ -0.7
CD44-210ENST00000434472 THP07101 528 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 GM2AP17900 193 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 AOC1P19801 751 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 CYP2B6P20813 491 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 VHLP40337 213 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 LIMK2P53671 638 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 RPL10AP62906 217 aaKnown RBP10.67□□□□□ -0.7
CD44-210ENST00000434472 CRADDP78560 199 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 GALNT2Q10471 571 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 BSPRYQ5W0U4 402 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 RFWD3Q6PCD5 774 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 HFE2Q6ZVN8 426 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 BEND5Q7L4P6 421 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 LINC00523Q86TU6 105 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 TMEM135Q86UB9 458 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 METTL23Q86XA0 190 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 OR52K1Q8NGK4 314 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 KCNV2Q8TDN2 545 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 ZNF669Q96BR6 464 aaPredicted RBP10.67□□□□□ -0.7
CD44-210ENST00000434472 SMARCD1Q96GM5 515 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 PRR11Q96HE9 360 aaPredicted RBP10.67□□□□□ -0.7
CD44-210ENST00000434472 PPP1R2P1Q96PQ5 205 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 RBBP8Q99708 897 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 SMOQ99835 787 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 SYT17Q9BSW7 474 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 VANGL2Q9ULK5 521 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 DNAJC16Q9Y2G8 782 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 GIT1Q9Y2X7 761 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 NR2E3Q9Y5X4 410 aa10.67□□□□□ -0.7
CD44-210ENST00000434472 C2orf71A6NGG8 1288 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 YJEFN3A6XGL0 299 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 TMEM114B3SHH9 223 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PSMG1O95456 288 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 GSRP00390 522 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 SRGAP2BP0DMP2 458 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 KITP10721 976 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 RALBP11234 206 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 NCAM1P13591 858 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 CPA3P15088 417 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ALOX15P16050 662 aaPredicted RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 ACADSP16219 412 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ATP6V1C1P21283 382 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 HTR7P34969 479 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 MLH1P40692 756 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 RGS2P41220 211 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 HARS2P49590 506 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 CXCR3P49682 368 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PRKAA2P54646 552 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ABCE1P61221 599 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 SLC34A1Q06495 639 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 KPNB1Q14974 876 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 PCLAFQ15004 111 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 FSCN1Q16658 493 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 TRMT5Q32P41 509 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 HSF5Q4G112 596 aaPredicted RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 ANKRD20A4Q4UJ75 823 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 KHDC1Q4VXA5 237 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 CES4AQ5XG92 561 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 KCTD11Q693B1 232 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 NAPEPLDQ6IQ20 393 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 C16orf46Q6P387 395 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 DCLRE1AQ6PJP8 1040 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 TTC7BQ86TV6 843 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 LCA5Q86VQ0 697 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 SCUBE1Q8IWY4 988 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 UNC5BQ8IZJ1 945 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 DNAAF3Q8N9W5 541 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PPFIBP2Q8ND30 876 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 DNAJC9Q8WXX5 260 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 TSGA13Q96PP4 275 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PTPN18Q99952 460 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms