RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 C1orf146Q5VVC0 180 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 ARMC3Q5W041 872 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 TMEM154Q6P9G4 183 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 RFX8Q6ZV50 586 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 CLEC14AQ86T13 490 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 PIGZQ86VD9 579 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 C18orf25Q96B23 403 aaPredicted RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 IFT43Q96FT9 208 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 EIF2AQ9BY44 585 aaKnown RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 FAM192AQ9GZU8 254 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 PRDM12Q9H4Q4 367 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 SPATS2LQ9NUQ6 558 aaKnown RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 SYBUQ9NX95 663 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 BFARQ9NZS9 450 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 SMIM28A0A1B0GU29 152 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 PSMD3O43242 534 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 TIMM44O43615 452 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 ITM2AO43736 263 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 AHCYL1O43865 530 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 FESP07332 822 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 KITP10721 976 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 CPA3P15088 417 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 ADSLP30566 484 aaPredicted RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 ADCYAP1R1P41586 468 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 CPA2P48052 419 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 NPY2RP49146 381 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 IDH3AP50213 366 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 MXRA7P84157 204 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 DSG1Q02413 1049 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 PPIDQ08752 370 aaKnown RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 ITPRIPL1Q6GPH6 555 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 ZCCHC23Q6ZST2 131 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 FAM131BQ86XD5 332 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 NME8Q8N427 588 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 SERBP1Q8NC51 408 aaKnown RBP eCLIP14□□□□□ -0.17
COL6A3-207ENST00000433762 B3GALNT2Q8NCR0 500 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 TRIM56Q9BRZ2 755 aaKnown RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 ZNF395Q9H8N7 513 aaPredicted RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 MARCOQ9UEW3 520 aaPredicted RBP14□□□□□ -0.17
COL6A3-207ENST00000433762 ANKRD6Q9Y2G4 727 aa14□□□□□ -0.17
COL6A3-207ENST00000433762 EEF2KO00418 725 aaKnown RBP13.99□□□□□ -0.17
COL6A3-207ENST00000433762 KIF3CO14782 793 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 SNUPNO95149 360 aaKnown RBP13.99□□□□□ -0.17
COL6A3-207ENST00000433762 SNAI1O95863 264 aaPredicted RBP13.99□□□□□ -0.17
COL6A3-207ENST00000433762 POLD2P49005 469 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 SESN2P58004 480 aaPredicted RBP13.99□□□□□ -0.17
COL6A3-207ENST00000433762 KIZQ2M2Z5 673 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 GJC2Q5T442 439 aaPredicted RBP13.99□□□□□ -0.17
COL6A3-207ENST00000433762 KCTD11Q693B1 232 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 PYROXD2Q8N2H3 581 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 HDAC11Q96DB2 347 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 PGBD4Q96DM1 585 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 MCMBPQ9BTE3 642 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 APOL6Q9BWW8 343 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 SNX15Q9NRS6 342 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 IL1RAPL1Q9NZN1 696 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 RPS6KL1Q9Y6S9 549 aa13.99□□□□□ -0.17
COL6A3-207ENST00000433762 PDHA1P08559 390 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 PIM1P11309 404 aaPredicted RBP13.98□□□□□ -0.17
COL6A3-207ENST00000433762 CSRP3P50461 194 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 CLCN2P51788 898 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 ADIGQ0VDE8 80 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 OR52E8Q6IFG1 317 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 C10orf107Q8IVU9 208 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 FBXO27Q8NI29 283 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 SYT15Q9BQS2 421 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 S100A14Q9HCY8 104 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 SETD4Q9NVD3 440 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 C6orf222P0C671 652 aaPredicted RBP13.98□□□□□ -0.17
COL6A3-207ENST00000433762 LMO2P25791 158 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 CALRP27797 417 aaKnown RBP13.98□□□□□ -0.17
COL6A3-207ENST00000433762 ADRA1BP35368 520 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 UBAP2LQ14157 1087 aaKnown RBP13.98□□□□□ -0.17
COL6A3-207ENST00000433762 DCAF6Q58WW2 860 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 LDLRAD1Q5T700 205 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 PDPK2PQ6A1A2 396 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 C16orf46Q6P387 395 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 EPGNQ6UW88 154 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 MAVSQ7Z434 540 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 OR6J1Q8NGC5 347 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 DTX3LQ8TDB6 740 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 PPP2R3CQ969Q6 453 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 FAM149B1Q96BN6 582 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 ECSITQ9BQ95 431 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 GBA3Q9H227 469 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 CXCL16Q9H2A7 254 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 LRRC4Q9HBW1 653 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 TMEM216Q9P0N5 145 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 VANGL2Q9ULK5 521 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 MFHAS1Q9Y4C4 1052 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 PSAT1Q9Y617 370 aa13.98□□□□□ -0.17
COL6A3-207ENST00000433762 GABRDO14764 452 aa13.97□□□□□ -0.17
COL6A3-207ENST00000433762 SPTLC1O15269 473 aa13.97□□□□□ -0.17
COL6A3-207ENST00000433762 F2P00734 622 aa13.97□□□□□ -0.17
COL6A3-207ENST00000433762 F9P00740 461 aa13.97□□□□□ -0.17
COL6A3-207ENST00000433762 PTPN3P26045 913 aa13.97□□□□□ -0.17
COL6A3-207ENST00000433762 CDC25CP30307 473 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms