RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FAM193BQ96PV7 902 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ACBD6Q9BR61 282 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TCF7L2Q9NQB0 619 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ADGRE2Q9UHX3 823 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 HDAC3O15379 428 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ITGALP20701 1170 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CXCR2P25025 360 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ALDH5A1P51649 535 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SPP2Q13103 211 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PPP2R2DQ66LE6 453 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CHST9Q7L1S5 443 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SNX32Q86XE0 403 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MCEEQ96PE7 176 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 STXBP5LQ9Y2K9 1186 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 NBASA2RRP1 2371 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CACNB4O00305 520 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CLDN11O75508 207 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 KRT6AP02538 564 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 KRT6BP04259 564 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 KRT6CP48668 564 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 NR1H2P55055 460 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 BAATQ14032 418 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 BBS9Q3SYG4 887 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PCID2Q5JVF3 399 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ENDOVQ8N8Q3 282 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 HJURPQ8NCD3 748 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 EBNA1BP2Q99848 306 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 FAM213AQ9BRX8 229 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TUBA8Q9NY65 449 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 RAB26Q9ULW5 256 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CDYLQ9Y232 598 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 C9IYK1 514 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 LTFP02788 710 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CHN1P15882 459 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 AKT1P31749 480 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 L1CAMP32004 1257 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SCTRP47872 440 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ATP4BP51164 291 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 GJA9P57773 515 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SNAP25P60880 206 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 OLR1P78380 273 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TGM3Q08188 693 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 STX3Q13277 289 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SLC29A2Q14542 456 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 AP1ARQ63HQ0 302 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 UCMAQ8WVF2 138 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SLC44A1Q8WWI5 657 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ALG3Q92685 438 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PTPRN2Q92932 1015 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TP53INP1Q96A56 240 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CBWD1Q9BRT8 395 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PPARGC1AQ9UBK2 798 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF541Q9H0D2 1346 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 FAM205CA6NFA0 338 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CCDC154A6NI56 674 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 GPR89AB7ZAQ6 455 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 GUCY1B2O75343 617 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 NTRK1P04629 796 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PFKMP08237 780 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 GPR89BP0CG08 455 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TARSP26639 723 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TCF7P36402 384 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 NUDT1P36639 197 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 NNMTP40261 264 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CDKN2BP42772 138 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SLC11A2P49281 568 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MRPL19P49406 292 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 AP1S2P56377 157 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 DLG4P78352 724 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SEL1L3Q68CR1 1132 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MON1AQ86VX9 555 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CERS5Q8N5B7 392 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ADCY4Q8NFM4 1077 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF473Q8WTR7 871 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 RNF34Q969K3 372 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ATG4CQ96DT6 458 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SAAL1Q96ER3 474 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MRPL48Q96GC5 212 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CAMKK2Q96RR4 588 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ROGDIQ9GZN7 287 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 GGA3Q9NZ52 723 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 HMGXB4Q9UGU5 601 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 A0A088AWK7 358 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SLITRK5O94991 958 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ENO2P09104 434 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 RAG1P15918 1043 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF10P21506 573 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 KCNA5P22460 613 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 NDST2P52849 883 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SMIM11AP58511 58 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TNK2Q07912 1038 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 KLF1Q13351 362 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 RPS6KA2Q15349 733 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CYB5D1Q6P9G0 228 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 FUKQ8N0W3 1084 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ISL2Q96A47 359 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MYO19Q96H55 970 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TRIM56Q9BRZ2 755 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TRIM4Q9C037 500 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 VANGL2Q9ULK5 521 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms