RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MFSD7Q6UXD7 560 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 RNF111Q6ZNA4 994 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 CBWD2Q8IUF1 395 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 C4orf19Q8IY42 314 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 C7orf31Q8N865 590 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 OR6P1Q8NGX9 317 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 ACTRT2Q8TDY3 377 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 DIS3LQ8TF46 1054 aaKnown RBP8.28□□□□□ -1.08
VTI1A-202ENST00000432306 UIMC1Q96RL1 719 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 DDX50Q9BQ39 737 aaKnown RBP8.28□□□□□ -1.08
VTI1A-202ENST00000432306 IDI2Q9BXS1 227 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 KLHL4Q9C0H6 718 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 PCIF1Q9H4Z3 704 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 ZNF696Q9H7X3 374 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 PREBQ9HCU5 417 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 INTS7Q9NVH2 962 aaKnown RBP8.28□□□□□ -1.08
VTI1A-202ENST00000432306 TBCCD1Q9NVR7 557 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 GIMAP2Q9UG22 337 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 HERC5Q9UII4 1024 aaKnown RBP8.28□□□□□ -1.08
VTI1A-202ENST00000432306 ZNF112Q9UJU3 913 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 ZBTB21Q9ULJ3 1066 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 PPT2Q9UMR5 302 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 PLLPQ9Y342 182 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 PCDHAC2Q9Y5I4 1007 aa8.28□□□□□ -1.08
VTI1A-202ENST00000432306 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.28□□□□□ -1.08
VTI1A-202ENST00000432306 SIPA1L1O43166 1804 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 A0A0B4J269 797 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 FAM237BA0A1B0GVD1 139 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 C3orf70A6NLC5 250 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 TISP43B9A030 160 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 M0R3H8 397 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 VILLO15195 856 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 GREM1O60565 184 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 NDUFB10O96000 172 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 TFAP2AP05549 437 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 CD48P09326 243 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 ZSCAN5DPP0CG00 497 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 ALOX15P16050 662 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 XPAP23025 273 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 PRDX6P30041 224 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 SSTR1P30872 391 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 L1CAMP32004 1257 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 CDH5P33151 784 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 MAN2A2P49641 1150 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 HPCAP84074 193 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 TBL3Q12788 808 aaKnown RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 SNAPC2Q13487 334 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 TUBB3Q13509 450 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 PIGHQ14442 188 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 FNDC3BQ53EP0 1204 aaKnown RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 HSP90AA5PQ58FG0 334 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 RABGAP1LQ5R372 815 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 MFSD4BQ5TF39 518 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 C1orf146Q5VVC0 180 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 APOBEC3HQ6NTF7 200 aaKnown RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 B3GNT6Q6ZMB0 384 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 BBS12Q6ZW61 710 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 CYS1Q717R9 158 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 ERO1BQ86YB8 467 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 AHI1Q8N157 1196 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 PDIK1LQ8N165 341 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 TMEM161BQ8NDZ6 487 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 FBXO36Q8NEA4 188 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 NSUN6Q8TEA1 469 aaKnown RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 STON2Q8WXE9 905 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 SERAC1Q96JX3 654 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 CATSPER2Q96P56 530 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF577Q9BSK1 485 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF518BQ9C0D4 1074 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 ELAC1Q9H777 363 aaKnown RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 AGO4Q9HCK5 861 aaKnown RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 UBP1Q9NZI7 540 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF70Q9UC06 446 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 RAB26Q9ULW5 256 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 TBX20Q9UMR3 447 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 TEX264Q9Y6I9 313 aa8.27□□□□□ -1.09
VTI1A-202ENST00000432306 RANBP2P49792 3224 aaKnown RBP8.27□□□□□ -1.09
VTI1A-202ENST00000432306 ZNFX1Q9P2E3 1918 aaKnown RBP8.26□□□□□ -1.09
VTI1A-202ENST00000432306 TCRBV9S1A1TA0A576 114 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 FAM221AA4D161 298 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 I3L4J1 428 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 TRDMT1O14717 391 aaKnown RBP8.26□□□□□ -1.09
VTI1A-202ENST00000432306 DHX15O43143 795 aaKnown RBP8.26□□□□□ -1.09
VTI1A-202ENST00000432306 KLHL2O95198 593 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 LSM8O95777 96 aaKnown RBP8.26□□□□□ -1.09
VTI1A-202ENST00000432306 PDGFAP04085 211 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 CALB1P05937 261 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 POLR2MP0CAP2 368 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 ARAFP10398 606 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 MTHFD1P11586 935 aaKnown RBP8.26□□□□□ -1.09
VTI1A-202ENST00000432306 ATP6V1B1P15313 513 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 DESP17661 470 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 CD58P19256 250 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 BGNP21810 368 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 LPOP22079 712 aaPredicted RBP8.26□□□□□ -1.09
VTI1A-202ENST00000432306 PRKCHP24723 683 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 ATP6V1E1P36543 226 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 MAGEA6P43360 314 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 INHBCP55103 352 aa8.26□□□□□ -1.09
VTI1A-202ENST00000432306 WNT7BP56706 349 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms