RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 CCDC60Q8IWA6 550 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 ADGRG5Q8IZF4 528 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 PNPT1Q8TCS8 783 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 BCL7CQ8WUZ0 217 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 TMEM121Q9BTD3 319 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 MXD3Q9BW11 206 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 ALG13Q9NP73 1137 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 SAYSD1Q9NPB0 183 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 XPO7Q9UIA9 1087 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 PCM1Q15154 2024 aa9.07□□□□□ -0.96
CDC42BPA-206ENST00000429440 CROCCQ5TZA2 2017 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 POTEB3A0JP26 581 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 AURKAO14965 403 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 EPHA3P29320 983 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 EEF1DP29692 281 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 GRM5P41594 1212 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 POLR2GP62487 172 aaKnown RBP eCLIP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 POU6F2P78424 691 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC18A2Q05940 514 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 NME3Q13232 169 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 NAB1Q13506 487 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 VPS72Q15906 364 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 PFKFB3Q16875 520 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 PLA2G4EQ3MJ16 856 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 IZUMO3Q5VZ72 239 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 POTEBQ6S5H4 581 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 BNC2Q6ZN30 1099 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 METTL3Q86U44 580 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 CRLF3Q8IUI8 442 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 DEPDC4Q8N2C3 294 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 PARP8Q8N3A8 854 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 GLIS3Q8NEA6 775 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 OR13F1Q8NGS4 319 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 OR5H6Q8NGV6 325 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 RASGRP4Q8TDF6 673 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 DEPDC7Q96QD5 511 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 SECISBP2Q96T21 854 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 TMEM246Q9BRR3 403 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 POLR1BQ9H9Y6 1135 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 IGSF5Q9NSI5 407 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZNF229Q9UJW7 825 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZNF221Q9UK13 617 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC27A5Q9Y2P5 690 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 UGT2A1Q9Y4X1 527 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 TNKSO95271 1327 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 MAST2Q6P0Q8 1798 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 MAGEB6P1A0A0J9YX57 407 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 MYMKA6NI61 221 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 HDAC3O15379 428 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 ALDH1A2O94788 518 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 CPNE6O95741 557 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 PGK2P07205 417 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 ATF7P17544 494 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 IMPDH1P20839 514 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 COMTP21964 271 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 PRKAA2P54646 552 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 OLR1P78380 273 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 S100A12P80511 92 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 MRPS22P82650 360 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 GHRHRQ02643 423 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 TTC33Q6PID6 262 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 TPH2Q8IWU9 490 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 C1orf54Q8WWF1 131 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 SH3KBP1Q96B97 665 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 NGLY1Q96IV0 654 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 YTHDF1Q9BYJ9 559 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 NAA50Q9GZZ1 169 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 THAP2Q9H0W7 228 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 CYP4F11Q9HBI6 524 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 SRP68Q9UHB9 627 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 IPO11Q9UI26 975 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 MN1Q10571 1320 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 NHSQ6T4R5 1651 aa9.06□□□□□ -0.96
CDC42BPA-206ENST00000429440 BAZ2BQ9UIF8 2168 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 A0A0B4J269 797 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 A0A1W2PQ72 361 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 MINDY4BA8MYZ0 360 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 CCNKO75909 580 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 OLFM2O95897 454 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 ITGB3P05106 788 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 GSNP06396 782 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 GFAPP14136 432 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 JUNBP17275 347 aaPredicted RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 MYF6P23409 242 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 TM4SF1P30408 202 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 GRIA3P42263 894 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 MRPS15P82914 257 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 CENPCQ03188 943 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 BST2Q10589 180 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 TUBB3Q13509 450 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 FLOT2Q14254 428 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 ESCO2Q56NI9 601 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 NHSL2Q5HYW2 709 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 PPP4R3CPQ6ZMV5 832 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 GSTA5Q7RTV2 222 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 FRMD5Q7Z6J6 570 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 LINC00518Q8N0U6 118 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms