RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 C3orf70A6NLC5 250 aaPredicted RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 ALDH1A1P00352 501 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 BPGMP07738 259 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 CTSHP09668 335 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 SERPINB9P50453 376 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 PITX1P78337 314 aaPredicted RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 CYTH1Q15438 398 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 EFHC1Q5JVL4 640 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 SPDYAQ5MJ70 313 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 TRNP1Q6NT89 227 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 CAND1Q86VP6 1230 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 RELL1Q8IUW5 271 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 TP53INP2Q8IXH6 220 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 MAB21L3Q8N8X9 362 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 APPL2Q8NEU8 664 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 IPMKQ8NFU5 416 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 HASPINQ8TF76 798 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 LRGUKQ96M69 825 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 NUF2Q9BZD4 464 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 CXCL16Q9H2A7 254 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 DDIT4Q9NX09 232 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 KCNK4Q9NYG8 393 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 EURLQ9NYK6 297 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 SLC7A8Q9UHI5 535 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 PPM1HQ9ULR3 514 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 CORO1CQ9ULV4 474 aaPredicted RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 PTCH2Q9Y6C5 1203 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 DOCK5Q9H7D0 1870 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 MFSD11O43934 449 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 GLRA3O75311 464 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 PMPCBO75439 489 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 GPC4O75487 556 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 PGM3O95394 542 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 JCHAINP01591 159 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 PLK1P53350 603 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 TBL3Q12788 808 aaKnown RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 GRIK3Q13003 919 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 KCNJ11Q14654 390 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 PPP1R15BQ5SWA1 713 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 ZNF618Q5T7W0 954 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 IYDQ6PHW0 289 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 ARMCX2Q7L311 632 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 ST13P4Q8IZP2 240 aaPredicted RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 NIPA2Q8N8Q9 360 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 GPRC5AQ8NFJ5 357 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 SHKBP1Q8TBC3 707 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 CATSPER2Q96P56 530 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 CSPG4P5Q96PW8 444 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 OMDQ99983 421 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 FRMD8P1Q9BZ68 369 aaPredicted RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 PDZD7Q9H5P4 517 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 RETREG1Q9H6L5 497 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 TMEM216Q9P0N5 145 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 GABRQQ9UN88 632 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 SNX10Q9Y5X0 201 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 ANKRD12Q6UB98 2062 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 A0A096LPK6 155 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 TIMM44O43615 452 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 RECQL4O94761 1208 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 RAG1P15918 1043 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 ZFXP17010 805 aaPredicted RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 SP100P23497 879 aaPredicted RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 EPHA3P29320 983 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 NDUFV1P49821 464 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 PAPOLAP51003 745 aaKnown RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 HDAC4P56524 1084 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 POU6F1Q14863 301 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 TARBP2Q15633 366 aaKnown RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 SOWAHAQ2M3V2 549 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 SH2D4BQ5SQS7 431 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 RIOX2Q8IUF8 465 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 PQLC3Q8N755 202 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 SNX31Q8N9S9 440 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 OR6J1Q8NGC5 347 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 FNIP1Q8TF40 1166 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 NMD3Q96D46 503 aaKnown RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 MCRS1Q96EZ8 462 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 P2RY11Q96G91 374 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 ZNF333Q96JL9 665 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 EIF2AQ9BY44 585 aaKnown RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 CYP3A43Q9HB55 503 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 UBAP1Q9NZ09 502 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 SUN2Q9UH99 717 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 TSR3Q9UJK0 312 aaKnown RBP8.25□□□□□ -1.09
HPS4-205ENST00000429411 APPL1Q9UKG1 709 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 STAP1Q9ULZ2 295 aa8.25□□□□□ -1.09
HPS4-205ENST00000429411 MAGEA13PA6NCF6 341 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CXCL11O14625 94 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 WFS1O76024 890 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CSPG5O95196 566 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 STAMBPO95630 424 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 ITGA2BP08514 1039 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 LINGO3P0C6S8 592 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 MCF2P10911 925 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 ACADSP16219 412 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CYP3A5P20815 502 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 NME5P56597 212 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 SLC10A2Q12908 348 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 CERCAMQ5T4B2 595 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 PACS1Q6VY07 963 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms