RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 NAT10Q9H0A0 1025 aaKnown RBP19.02■□□□□ 0.64
GPC1-205ENST00000427506 MTG2Q9H4K7 406 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 FSCN3Q9NQT6 498 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 PIGVQ9NUD9 493 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 SUSD2Q9UGT4 822 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 VANGL2Q9ULK5 521 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 DAAM1Q9Y4D1 1078 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 PAXBP1Q9Y5B6 917 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 HS3ST4Q9Y661 456 aa19.02■□□□□ 0.64
GPC1-205ENST00000427506 CACNA1AO00555 2505 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 LGALS16A8MUM7 142 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 EPHB6O15197 1021 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 RNASEH1O60930 286 aaKnown RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 PAGE1O75459 146 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 F9P00740 461 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 IGLV3-19P01714 112 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 SRPRAP08240 638 aaKnown RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 PDGFRAP16234 1089 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 GGCXP38435 758 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 NNMTP40261 264 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 CTSOP43234 321 aaPredicted RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 NUMBP49757 651 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 OXCT1P55809 520 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 RPS14P62263 151 aaKnown RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 NOMO3P69849 1222 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 ECT2LQ008S8 904 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 CDR2Q01850 454 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 CENPCQ03188 943 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 ZBTB16Q05516 673 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 HNRNPA1L2Q32P51 320 aaKnown RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 TTC31Q49AM3 519 aaPredicted RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 BRMS1LQ5PSV4 323 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 ZNF776Q68DI1 518 aaPredicted RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 DHX40Q8IX18 779 aaKnown RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 AOPEPQ8N6M6 819 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 IGSF8Q969P0 613 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 MRGPRX3Q96LB0 322 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 TBCBQ99426 244 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 TKTL2Q9H0I9 626 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 MIR1-1HGQ9H1L0 117 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 NOCTQ9UK39 431 aaKnown RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 SIK3Q9Y2K2 1263 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 TNRC6BQ9UPQ9 1833 aaKnown RBP19.01■□□□□ 0.63
GPC1-205ENST00000427506 DNAH14Q0VDD8 3507 aa19.01■□□□□ 0.63
GPC1-205ENST00000427506 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19■□□□□ 0.63
GPC1-205ENST00000427506 SIN3BO75182 1162 aa19■□□□□ 0.63
GPC1-205ENST00000427506 KCNK5O95279 499 aa19■□□□□ 0.63
GPC1-205ENST00000427506 ADRB1P08588 477 aa19■□□□□ 0.63
GPC1-205ENST00000427506 ZNF18P17022 549 aa19■□□□□ 0.63
GPC1-205ENST00000427506 TFE3P19532 575 aaPredicted RBP19■□□□□ 0.63
GPC1-205ENST00000427506 JAM2P57087 298 aa19■□□□□ 0.63
GPC1-205ENST00000427506 ZNF177Q13360 481 aaPredicted RBP19■□□□□ 0.63
GPC1-205ENST00000427506 SLC25A52Q3SY17 297 aa19■□□□□ 0.63
GPC1-205ENST00000427506 DCAF12L1Q5VU92 463 aa19■□□□□ 0.63
GPC1-205ENST00000427506 OTUD1Q5VV17 481 aaPredicted RBP19■□□□□ 0.63
GPC1-205ENST00000427506 KDM1BQ8NB78 822 aa19■□□□□ 0.63
GPC1-205ENST00000427506 GANCQ8TET4 914 aa19■□□□□ 0.63
GPC1-205ENST00000427506 MYO19Q96H55 970 aa19■□□□□ 0.63
GPC1-205ENST00000427506 RPL10LQ96L21 214 aaKnown RBP19■□□□□ 0.63
GPC1-205ENST00000427506 PPP1R9BQ96SB3 815 aa19■□□□□ 0.63
GPC1-205ENST00000427506 TMEM63CQ9P1W3 806 aa19■□□□□ 0.63
GPC1-205ENST00000427506 NCKAP1Q9Y2A7 1128 aa19■□□□□ 0.63
GPC1-205ENST00000427506 MUC22E2RYF6 1773 aaPredicted RBP19■□□□□ 0.63
GPC1-205ENST00000427506 METTL12A8MUP2 240 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 TTC34A8MYJ7 566 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 ADCY5O95622 1261 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 SYPP08247 313 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 MZF1P28698 734 aaPredicted RBP18.99■□□□□ 0.63
GPC1-205ENST00000427506 FLT3P36888 993 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 CXCR3P49682 368 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 NOVA1P51513 510 aaKnown RBP18.99■□□□□ 0.63
GPC1-205ENST00000427506 SULT2A1Q06520 285 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 NCAPHQ15003 741 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 ANO6Q4KMQ2 910 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 PSAPL1Q6NUJ1 521 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 LRSAM1Q6UWE0 723 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 C14orf80Q86SX3 495 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 SNX19Q92543 992 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 PGAP3Q96FM1 320 aaPredicted RBP18.99■□□□□ 0.63
GPC1-205ENST00000427506 ADAM33Q9BZ11 813 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 BTBD1Q9H0C5 482 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 RSPH9Q9H1X1 276 aaPredicted RBP18.99■□□□□ 0.63
GPC1-205ENST00000427506 CAPN10Q9HC96 672 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 TMEM51Q9NW97 253 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 ARHGEF38Q9NXL2 777 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 SLCO3A1Q9UIG8 710 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 CKAP5Q14008 2032 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 CEP192Q8TEP8 1941 aa18.99■□□□□ 0.63
GPC1-205ENST00000427506 EDDM13A0A1B0GTR0 161 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 TARSL2A2RTX5 802 aaKnown RBP18.98■□□□□ 0.63
GPC1-205ENST00000427506 ARHGAP33O14559 1287 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 CLDN11O75508 207 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 CYP1A1P04798 512 aaPredicted RBP18.98■□□□□ 0.63
GPC1-205ENST00000427506 CHRNB2P17787 502 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 ACSL1P33121 698 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 STK19P49842 368 aaPredicted RBP18.98■□□□□ 0.63
GPC1-205ENST00000427506 IRAK1P51617 712 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 FMO1Q01740 532 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 SFSWAPQ12872 951 aaKnown RBP18.98■□□□□ 0.63
GPC1-205ENST00000427506 CXorf57Q6NSI4 855 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms