RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 C1orf216Q8TAB5 229 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 MRGPRX3Q96LB0 322 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 TUBGCP2Q9BSJ2 902 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 FAM204AQ9H8W3 233 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 DDIT4Q9NX09 232 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.7■□□□□ 0.9
CCDC107-206ENST00000426546 CEP83Q9Y592 693 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 ITIH6Q6UXX5 1313 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 SEMA4FO95754 770 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 ABCB4P21439 1286 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 CCR1P32246 355 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 CLCN1P35523 988 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 KRT9P35527 623 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 MTA1Q13330 715 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 SLC12A1Q13621 1099 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 VWA3BQ502W6 1294 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 MIIPQ5JXC2 388 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 LRSAM1Q6UWE0 723 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 OLFML1Q6UWY5 402 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 MMS22LQ6ZRQ5 1243 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 FAM183BPQ6ZVS7 135 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 USP30Q70CQ3 517 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 FAM71AQ8IYT1 594 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 DEFB106AQ8N104 65 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 C1orf131Q8NDD1 294 aaKnown RBP20.69■□□□□ 0.9
CCDC107-206ENST00000426546 PRMT1Q99873 361 aaKnown RBP20.69■□□□□ 0.9
CCDC107-206ENST00000426546 C6orf106Q9H6K1 298 aaPredicted RBP20.69■□□□□ 0.9
CCDC107-206ENST00000426546 SGK2Q9HBY8 427 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 LMBRD1Q9NUN5 540 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 ERVW-1Q9UQF0 538 aa20.69■□□□□ 0.9
CCDC107-206ENST00000426546 DSPP15924 2871 aaKnown RBP20.69■□□□□ 0.9
CCDC107-206ENST00000426546 FREM2Q5SZK8 3169 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 A0A1B0GVM2 712 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 TCAF2A6NFQ2 919 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 TAF4O00268 1085 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 FOXN3O00409 490 aaPredicted RBP20.68■□□□□ 0.9
CCDC107-206ENST00000426546 RNASEH1O60930 286 aaKnown RBP20.68■□□□□ 0.9
CCDC107-206ENST00000426546 BPIFB4P59827 614 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 ECT2LQ008S8 904 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 RABGAP1LQ5R372 815 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 IL27RAQ6UWB1 636 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 SLC26A9Q7LBE3 791 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 RAB44Q7Z6P3 723 aaPredicted RBP20.68■□□□□ 0.9
CCDC107-206ENST00000426546 SLC47A2Q86VL8 602 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 SNX19Q92543 992 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 NUP62CLQ9H1M0 184 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 PABPC3Q9H361 631 aaKnown RBP20.68■□□□□ 0.9
CCDC107-206ENST00000426546 MTG2Q9H4K7 406 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 OSGEPQ9NPF4 335 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 LHX6Q9UPM6 363 aa20.68■□□□□ 0.9
CCDC107-206ENST00000426546 EDDM13A0A1B0GTR0 161 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 TARSL2A2RTX5 802 aaKnown RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 SIN3BO75182 1162 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 DAB1O75553 588 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 CER1O95813 267 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 ERBB2P04626 1255 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 CAPNS1P04632 268 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 ZNF883P0CG24 379 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 RDXP35241 583 aaKnown RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 AFF3P51826 1226 aaKnown RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 SFSWAPQ12872 951 aaKnown RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 ZNF423Q2M1K9 1284 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 PTPN20Q4JDL3 420 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 CT47A1Q5JQC4 288 aaPredicted RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 RNF219Q5W0B1 726 aaPredicted RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 OR6B2Q6IFH4 312 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 DPY19L2P1Q6NXN4 242 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 ZDHHC17Q8IUH5 632 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 DHX40Q8IX18 779 aaKnown RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 CCAR2Q8N163 923 aaKnown RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 ZNF397Q8NF99 534 aaPredicted RBP20.67■□□□□ 0.9
CCDC107-206ENST00000426546 RNF34Q969K3 372 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 CAMK1GQ96NX5 476 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 NCKAP1Q9Y2A7 1128 aa20.67■□□□□ 0.9
CCDC107-206ENST00000426546 SYNJ2BP-COX16A0A087WUM0 186 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 SH3BP5O60239 455 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 GRAP2O75791 330 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 PNMA6AP0CW24 399 aaPredicted RBP20.66■□□□□ 0.9
CCDC107-206ENST00000426546 MATKP42679 507 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 CTSOP43234 321 aaPredicted RBP20.66■□□□□ 0.9
CCDC107-206ENST00000426546 OXCT1P55809 520 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 SLC6A3Q01959 620 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 CST6Q15828 149 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 C9orf64Q5T6V5 341 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 NAXDQ8IW45 347 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 APCDD1Q8J025 514 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 BIRC7Q96CA5 298 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 GAREM1Q9H706 876 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 SYNCQ9H7C4 482 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 RRN3Q9NYV6 651 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 COX16Q9P0S2 106 aa20.66■□□□□ 0.9
CCDC107-206ENST00000426546 TTC34A8MYJ7 566 aa20.65■□□□□ 0.9
CCDC107-206ENST00000426546 CD27P26842 260 aa20.65■□□□□ 0.9
CCDC107-206ENST00000426546 CDH5P33151 784 aaPredicted RBP20.65■□□□□ 0.9
CCDC107-206ENST00000426546 NOS2P35228 1153 aa20.65■□□□□ 0.9
CCDC107-206ENST00000426546 PLK1P53350 603 aa20.65■□□□□ 0.9
CCDC107-206ENST00000426546 BNC1Q01954 994 aa20.65■□□□□ 0.9
CCDC107-206ENST00000426546 SULT2A1Q06520 285 aa20.65■□□□□ 0.9
CCDC107-206ENST00000426546 RAPGEF1Q13905 1077 aa20.65■□□□□ 0.9
CCDC107-206ENST00000426546 DRAP1Q14919 205 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms