RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 DDIT4Q9NX09 232 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 TAGLN3Q9UI15 199 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 CHRNGP07510 517 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 RAG1P15918 1043 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.21
USP42-203ENST00000426246 NAGLUP54802 743 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 HDAC4P56524 1084 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 FOXD4Q12950 439 aaPredicted RBP13.71□□□□□ -0.21
USP42-203ENST00000426246 CTBP1Q13363 440 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 USP10Q14694 798 aaKnown RBP13.71□□□□□ -0.21
USP42-203ENST00000426246 DGKDQ16760 1214 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 PARP6Q2NL67 630 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 CES4AQ5XG92 561 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 PDPK2PQ6A1A2 396 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 CDKL3Q8IVW4 592 aaPredicted RBP13.71□□□□□ -0.21
USP42-203ENST00000426246 PHC3Q8NDX5 983 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 MAGEC3Q8TD91 643 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 KHSRPQ92945 711 aaKnown RBP eCLIP13.71□□□□□ -0.21
USP42-203ENST00000426246 PANX3Q96QZ0 392 aa13.71□□□□□ -0.21
USP42-203ENST00000426246 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.21
USP42-203ENST00000426246 A0A1B0GVG6 124 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 PEX2P28328 305 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 PRAMEP78395 509 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 ADAM17P78536 824 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 SLC6A3Q01959 620 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 DEUP1Q05D60 604 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 ZNF280DQ6N043 979 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 CYP2R1Q6VVX0 501 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 IFNEQ86WN2 208 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 PCDH20Q8N6Y1 951 aaKnown RBP13.71□□□□□ -0.22
USP42-203ENST00000426246 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 ZNF184Q99676 751 aaPredicted RBP13.71□□□□□ -0.22
USP42-203ENST00000426246 EBF3Q9H4W6 596 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 PIF1Q9H611 641 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 CHRAC1Q9NRG0 131 aa13.71□□□□□ -0.22
USP42-203ENST00000426246 CAPN8A6NHC0 703 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 MAGEB2O15479 319 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 HUS1O60921 280 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 ALADP13716 330 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 ARPP19P56211 112 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 ART3Q13508 389 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 GRIK4Q16099 956 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 NRF1Q16656 503 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 WASHC2DQ5SRD0 308 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 TMPRSS6Q8IU80 811 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP42-203ENST00000426246 PLD6Q8N2A8 252 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 ICA1LQ8NDH6 482 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 P2RY11Q96G91 374 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 HHIPL1Q96JK4 782 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 ZMAT2Q96NC0 199 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 TUBGCP5Q96RT8 1024 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 EBNA1BP2Q99848 306 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 USP29Q9HBJ7 922 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 POPDC2Q9HBU9 364 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 PRMT7Q9NVM4 692 aaPredicted RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 TRIP11Q15643 1979 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 TK2O00142 265 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 EEF2KO00418 725 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 RECQL4O94761 1208 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 ZNF132P52740 706 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 AP3M2P53677 418 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 TBL3Q12788 808 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 ACAP1Q15027 740 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 TCEAL1Q15170 157 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 SYPL2Q5VXT5 272 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 HFE2Q6ZVN8 426 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 TRPV1Q8NER1 839 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 DIS3LQ8TF46 1054 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 PHF21BQ96EK2 531 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 KCNK16Q96T55 309 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 EURLQ9NYK6 297 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 HBS1LQ9Y450 684 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 TTC24A2A3L6 582 aaPredicted RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 MYCP01106 439 aaPredicted RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 USP17L7P0C7H9 530 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 CPA3P15088 417 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 MRPS35P82673 323 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 PIGZQ86VD9 579 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 ZNF781Q8N8C0 355 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 PIWIL2Q8TC59 973 aaKnown RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 CSPG4P5Q96PW8 444 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 KCTD15Q96SI1 283 aaPredicted RBP13.7□□□□□ -0.22
USP42-203ENST00000426246 ARHGAP39Q9C0H5 1083 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 PDZD7Q9H5P4 517 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 TNFSF13BQ9Y275 285 aa13.7□□□□□ -0.22
USP42-203ENST00000426246 SDR42E2A6NKP2 422 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 TMEM233B4DJY2 109 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 HAS3O00219 553 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 RFPL1O75677 317 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 HNRNPLP14866 589 aaKnown RBP eCLIP13.69□□□□□ -0.22
USP42-203ENST00000426246 SLC12A2P55011 1212 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 DSG1Q02413 1049 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 STILQ15468 1287 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 SH2D4BQ5SQS7 431 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 SNX32Q86XE0 403 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms