RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 SFMBT2Q5VUG0 894 aa14.06□□□□□ -0.16
SNX3-204ENST00000426155 PMS2CLQ68D20 193 aa14.06□□□□□ -0.16
SNX3-204ENST00000426155 CXorf57Q6NSI4 855 aaKnown RBP14.06□□□□□ -0.16
SNX3-204ENST00000426155 SND1Q7KZF4 910 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNX3-204ENST00000426155 ZNF571Q7Z3V5 609 aaPredicted RBP14.06□□□□□ -0.16
SNX3-204ENST00000426155 DEFB119Q8N690 84 aa14.06□□□□□ -0.16
SNX3-204ENST00000426155 RNF214Q8ND24 703 aa14.06□□□□□ -0.16
SNX3-204ENST00000426155 MYO19Q96H55 970 aa14.06□□□□□ -0.16
SNX3-204ENST00000426155 ZC3H10Q96K80 434 aaKnown RBP14.06□□□□□ -0.16
SNX3-204ENST00000426155 TMEM245Q9H330 911 aa14.06□□□□□ -0.16
SNX3-204ENST00000426155 MYO6Q9UM54 1294 aa14.06□□□□□ -0.16
SNX3-204ENST00000426155 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.06□□□□□ -0.16
SNX3-204ENST00000426155 ADAMTS9Q9P2N4 1935 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 NUMA1Q14980 2115 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 A0A1B0GVM2 712 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 TCAF2A6NFQ2 919 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 SYNCRIPO60506 623 aaKnown RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 CAVIN2O95810 425 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 CALB1P05937 261 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 DLDP09622 509 aaKnown RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 KRT3P12035 628 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 POLR2EP19388 210 aaKnown RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 TNFAIP3P21580 790 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 RRM1P23921 792 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 SDC4P31431 198 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 RFC1P35251 1148 aaPredicted RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 STK19P49842 368 aaPredicted RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 GSCP56915 257 aaPredicted RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 SF3A2Q15428 464 aaKnown RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 ELF2Q15723 593 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 PLEKHG6Q3KR16 790 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 ARTNQ5T4W7 220 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 ACAD10Q6JQN1 1059 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 DNAJC24Q6P3W2 148 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 LRSAM1Q6UWE0 723 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 TMEFF1Q8IYR6 380 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 ZNF683Q8IZ20 524 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 C3orf20Q8ND61 904 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 CPLX3Q8WVH0 158 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 SPACA7Q96KW9 195 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 MRGPRX3Q96LB0 322 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 MCEEQ96PE7 176 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 SELENOOQ9BVL4 669 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 MAGEB5Q9BZ81 275 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 XPO4Q9C0E2 1151 aaKnown RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 TSPY26PQ9H489 355 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 SEMA4GQ9NTN9 838 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 AIPL1Q9NZN9 384 aa14.05□□□□□ -0.16
SNX3-204ENST00000426155 ATXN2Q99700 1313 aaKnown RBP14.05□□□□□ -0.16
SNX3-204ENST00000426155 IGHV1OR15-9A0A0B4J2B8 117 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 DDX3XO00571 662 aaKnown RBP eCLIP14.04□□□□□ -0.166e-33■■■■□ 21.4
SNX3-204ENST00000426155 NPC1O15118 1278 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 CCP110O43303 1012 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 TIMM44O43615 452 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 F9P00740 461 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 ATP5BP06576 529 aaKnown RBP14.04□□□□□ -0.16
SNX3-204ENST00000426155 CCDC172P0C7W6 258 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 MPLP40238 635 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 PTGER3P43115 390 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 DHPSP49366 369 aaPredicted RBP14.04□□□□□ -0.16
SNX3-204ENST00000426155 HDAC4P56524 1084 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 RPL7AP62424 266 aaKnown RBP14.04□□□□□ -0.16
SNX3-204ENST00000426155 CREB5Q02930 508 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 KLHL30Q0D2K2 578 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 FIGNQ5HY92 759 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 PPP1R15BQ5SWA1 713 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 TTC39BQ5VTQ0 682 aaPredicted RBP14.04□□□□□ -0.16
SNX3-204ENST00000426155 TCEAL6Q6IPX3 200 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 WDR59Q6PJI9 974 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 ARCQ7LC44 396 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 CCDC117Q8IWD4 279 aaPredicted RBP14.04□□□□□ -0.16
SNX3-204ENST00000426155 MCOLN2Q8IZK6 566 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 CCDC185Q8N715 623 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 FAM172AQ8WUF8 416 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 TCEAL3Q969E4 200 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 TTC17Q96AE7 1141 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 RPL10LQ96L21 214 aaKnown RBP14.04□□□□□ -0.16
SNX3-204ENST00000426155 PRDM16Q9HAZ2 1276 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 MPP6Q9NZW5 540 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 KIAA1522Q9P206 1035 aaPredicted RBP14.04□□□□□ -0.16
SNX3-204ENST00000426155 PLA2G4CQ9UP65 541 aa14.04□□□□□ -0.16
SNX3-204ENST00000426155 CHD5Q8TDI0 1954 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 TTC34A8MYJ7 566 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 E9PAM4 449 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 RHOBTB1O94844 696 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 ENDOD1O94919 500 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 GYPCP04921 128 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 PLEKP08567 350 aaPredicted RBP14.03□□□□□ -0.16
SNX3-204ENST00000426155 GPD1P21695 349 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 PRKCIP41743 596 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 PTPN9P43378 593 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 OGDHQ02218 1023 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 CAMK2GQ13555 558 aaPredicted RBP14.03□□□□□ -0.16
SNX3-204ENST00000426155 C5orf22Q49AR2 442 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 HGSNATQ68CP4 663 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 PRR23CQ6ZRP0 262 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 TFAP2DQ7Z6R9 452 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 TMPRSS6Q8IU80 811 aa14.03□□□□□ -0.16
SNX3-204ENST00000426155 ZNF557Q8N988 423 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms