RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 IGLV3-25P01717 112 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 IGHV4-34P06331 123 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 ACADMP11310 421 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 KLK7P49862 253 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 COPB1P53618 953 aaKnown RBP13.44□□□□□ -0.26
VRK3-203ENST00000424804 PITX1P78337 314 aaPredicted RBP13.44□□□□□ -0.26
VRK3-203ENST00000424804 ZBTB16Q05516 673 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 ARID5BQ14865 1188 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 KIF19Q2TAC6 998 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 CDKAL1Q5VV42 579 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 BEND5Q7L4P6 421 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 UNC45BQ8IWX7 931 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 GOLGA1Q92805 767 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 SLC4A5Q9BY07 1137 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
VRK3-203ENST00000424804 RSPH9Q9H1X1 276 aaPredicted RBP13.44□□□□□ -0.26
VRK3-203ENST00000424804 TM9SF3Q9HD45 589 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 TM7SF3Q9NS93 570 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 KIAA1522Q9P206 1035 aaPredicted RBP13.44□□□□□ -0.26
VRK3-203ENST00000424804 SERGEFQ9UGK8 458 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 PCDHGB2Q9Y5G2 931 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 SNX11Q9Y5W9 270 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 FHOD1Q9Y613 1164 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 KNTC1P50748 2209 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 NYNRINQ9P2P1 1898 aaKnown RBP13.44□□□□□ -0.26
VRK3-203ENST00000424804 SMG1Q96Q15 3661 aaKnown RBP13.43□□□□□ -0.26
VRK3-203ENST00000424804 ADAMTS20P59510 1910 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 ARID1BQ8NFD5 2236 aaPredicted RBP13.43□□□□□ -0.26
VRK3-203ENST00000424804 KCNK3O14649 394 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 PAPSS1O43252 624 aaPredicted RBP13.43□□□□□ -0.26
VRK3-203ENST00000424804 SIN3BO75182 1162 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 FBXO21O94952 628 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 CSKP41240 450 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 MATKP42679 507 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 CTSOP43234 321 aaPredicted RBP13.43□□□□□ -0.26
VRK3-203ENST00000424804 PTK2Q05397 1052 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 DRAP1Q14919 205 aaPredicted RBP13.43□□□□□ -0.26
VRK3-203ENST00000424804 DCAF6Q58WW2 860 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 MS4A13Q5J8X5 152 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 C9orf64Q5T6V5 341 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 NUGGCQ68CJ6 796 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 LAYNQ6UX15 382 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 TMEM110Q86TL2 294 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 TAC4Q86UU9 113 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 WDTC1Q8N5D0 677 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 ADAM32Q8TC27 787 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 ZNF606Q8WXB4 792 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 SHC3Q92529 594 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 FAM129BQ96TA1 746 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 FBRSQ9HAH7 460 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 FAM207AQ9NSI2 230 aaPredicted RBP13.43□□□□□ -0.26
VRK3-203ENST00000424804 STIM2Q9P246 746 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 TJP2Q9UDY2 1190 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 SUN2Q9UH99 717 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 TLR6Q9Y2C9 796 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 ANKRD6Q9Y2G4 727 aa13.43□□□□□ -0.26
VRK3-203ENST00000424804 FOXN3O00409 490 aaPredicted RBP13.42□□□□□ -0.26
VRK3-203ENST00000424804 SEMA4FO95754 770 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 ATP5BP06576 529 aaKnown RBP13.42□□□□□ -0.26
VRK3-203ENST00000424804 ATXN1LP0C7T5 689 aaKnown RBP13.42□□□□□ -0.26
VRK3-203ENST00000424804 POLR2EP19388 210 aaKnown RBP13.42□□□□□ -0.26
VRK3-203ENST00000424804 PTMSP20962 102 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 KRT9P35527 623 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 CTSKP43235 329 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 SLC11A2P49281 568 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 ARID5AQ03989 594 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 SCAPQ12770 1279 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 NNTQ13423 1086 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 HNRNPA1L2Q32P51 320 aaKnown RBP13.42□□□□□ -0.26
VRK3-203ENST00000424804 KLHDC7AQ5VTJ3 777 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 IL27RAQ6UWB1 636 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 PROSER1Q86XN7 944 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 MFN1Q8IWA4 741 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 APCDD1Q8J025 514 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 CFAP52Q8N1V2 620 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 FAM149B1Q96BN6 582 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 PRMT1Q99873 361 aaKnown RBP13.42□□□□□ -0.26
VRK3-203ENST00000424804 BTBD1Q9H0C5 482 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 PABPC3Q9H361 631 aaKnown RBP13.42□□□□□ -0.26
VRK3-203ENST00000424804 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 SLCO3A1Q9UIG8 710 aa13.42□□□□□ -0.26
VRK3-203ENST00000424804 ITIH6Q6UXX5 1313 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 BAHCC1Q9P281 2608 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 TTC34A8MYJ7 566 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 H0Y8X5 98 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 WNT9AO14904 365 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 CER1O95813 267 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 WNT1P04628 370 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 UCHL3P15374 230 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 CD27P26842 260 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 GRIA4P48058 902 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 AFF3P51826 1226 aaKnown RBP13.41□□□□□ -0.26
VRK3-203ENST00000424804 GALCP54803 685 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 UBXN1Q04323 297 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 SYCP1Q15431 976 aa13.41□□□□□ -0.26
VRK3-203ENST00000424804 SHBQ15464 509 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms