RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SUN2Q9UH99 717 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 USP18Q9UMW8 372 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 INVSQ9Y283 1065 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 LUC7L2Q9Y383 392 aaKnown RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP49-204ENST00000423567 BZW2Q9Y6E2 419 aaKnown RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 ATG2BQ96BY7 2078 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 C2CD4BA6NLJ0 364 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 SIGLEC16A6NMB1 481 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 TMCO5BA8MYB1 307 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 DCLK1O15075 740 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
USP49-204ENST00000423567 ACADMP11310 421 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 NDUFV2P19404 249 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 TFE3P19532 575 aaPredicted RBP11.28□□□□□ -0.6
USP49-204ENST00000423567 PRKCHP24723 683 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 NNMTP40261 264 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 P2RY2P41231 377 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 CSKP41240 450 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 CDH4P55283 916 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 ZBED6P86452 979 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 SULT2A1Q06520 285 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 PTP4A2Q12974 167 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 FUT11Q495W5 492 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 PITRM1Q5JRX3 1037 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 SLC36A4Q6YBV0 504 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 STRADAQ7RTN6 431 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 MCOLN2Q8IZK6 566 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 OLIG1Q8TAK6 271 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 CPLX3Q8WVH0 158 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 RLN3Q8WXF3 142 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 PRCCQ92733 491 aaPredicted RBP11.28□□□□□ -0.6
USP49-204ENST00000423567 SYN2Q92777 582 aaPredicted RBP11.28□□□□□ -0.6
USP49-204ENST00000423567 IGSF8Q969P0 613 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 TTC17Q96AE7 1141 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 MYEOVQ96EZ4 313 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 C1orf74Q96LT6 269 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 HAPLN3Q96S86 360 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 XPO4Q9C0E2 1151 aaKnown RBP11.28□□□□□ -0.6
USP49-204ENST00000423567 FBRSQ9HAH7 460 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 PRDM16Q9HAZ2 1276 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 PCDHGA5Q9Y5G8 931 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 FANCMQ8IYD8 2048 aa11.28□□□□□ -0.6
USP49-204ENST00000423567 AP5Z1O43299 807 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 SRGAP2O75044 1071 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 NDUFS2O75306 463 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 ENDOD1O94919 500 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 EPN2O95208 641 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 GJB6O95452 261 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 SRPRAP08240 638 aaKnown RBP11.27□□□□□ -0.61
USP49-204ENST00000423567 TPM1P09493 284 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 GZMAP12544 262 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 SKILP12757 684 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 HLA-EP13747 358 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 RFC1P35251 1148 aaPredicted RBP11.27□□□□□ -0.61
USP49-204ENST00000423567 GGCXP38435 758 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 PBX1P40424 430 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 DHPSP49366 369 aaPredicted RBP11.27□□□□□ -0.61
USP49-204ENST00000423567 ATXN1P54253 815 aaKnown RBP11.27□□□□□ -0.61
USP49-204ENST00000423567 ECT2LQ008S8 904 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 SPEM2Q0P670 501 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 PTPRNQ16849 979 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 C15orf59Q2T9L4 293 aaPredicted RBP11.27□□□□□ -0.61
USP49-204ENST00000423567 MAP7D1Q3KQU3 841 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 CCDC14Q49A88 953 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 FSCBQ5H9T9 825 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 C6orf118Q5T5N4 469 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 PMS2CLQ68D20 193 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 TRNP1Q6NT89 227 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 WDR59Q6PJI9 974 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 ZNF571Q7Z3V5 609 aaPredicted RBP11.27□□□□□ -0.61
USP49-204ENST00000423567 BNIPLQ7Z465 357 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 CIR1Q86X95 450 aaPredicted RBP11.27□□□□□ -0.61
USP49-204ENST00000423567 TMPRSS6Q8IU80 811 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 KDM1BQ8NB78 822 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 RNF214Q8ND24 703 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 OR2T3Q8NH03 318 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 JOSD2Q8TAC2 188 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 FAM172AQ8WUF8 416 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 SIPA1Q96FS4 1042 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 LMLNQ96KR4 655 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 MRGPRX1Q96LB2 322 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 MCEEQ96PE7 176 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 SYT11Q9BT88 431 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
USP49-204ENST00000423567 ADAM33Q9BZ11 813 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 MUC3BQ9H195 1237 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 DUSP15Q9H1R2 295 aaPredicted RBP11.27□□□□□ -0.61
USP49-204ENST00000423567 ARRDC1-AS1Q9H2J1 176 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 PARVAQ9NVD7 372 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 VPS28Q9UK41 221 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 CAPN11Q9UMQ6 739 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 CYP8B1Q9UNU6 501 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 ERVW-1Q9UQF0 538 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 ITIH6Q6UXX5 1313 aa11.27□□□□□ -0.61
USP49-204ENST00000423567 E9PAM4 449 aa11.26□□□□□ -0.61
USP49-204ENST00000423567 RNASEH1O60930 286 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms