RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.11□□□□□ -1.43
LINC00458-201ENST00000423442 PP2D1A8MPX8 630 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 GOLGA6L22H0YM25 854 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 NRP1O14786 923 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 CLDN3O15551 220 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 B4GALT5O43286 388 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 TRAPPC3O43617 180 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 TBCAO75347 108 aaKnown RBP6.11□□□□□ -1.43
LINC00458-201ENST00000423442 WEE2P0C1S8 567 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 FAM153BP0C7A2 387 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 PLA2G4BP0C869 781 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 BMP5P22003 454 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 APEX1P27695 318 aaKnown RBP6.11□□□□□ -1.43
LINC00458-201ENST00000423442 PBX3P40426 434 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 MLH1P40692 756 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 NPTX2P47972 431 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 ITIH3Q06033 890 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 STK38Q15208 465 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 IL17AQ16552 155 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 KYAT1Q16773 422 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 ST3GAL2Q16842 350 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 DCAF4L1Q3SXM0 396 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 ATAT1Q5SQI0 421 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 RRAGBQ5VZM2 374 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 C1orf186Q6ZWK4 172 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 GAREM2Q75VX8 874 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 ZNF280BQ86YH2 543 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 SLC39A11Q8N1S5 342 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 SYT2Q8N9I0 419 aaPredicted RBP6.11□□□□□ -1.43
LINC00458-201ENST00000423442 CASP10Q92851 521 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 SNX21Q969T3 373 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 GPHA2Q96T91 129 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 CCDC94Q9BW85 323 aaPredicted RBP6.11□□□□□ -1.43
LINC00458-201ENST00000423442 EIF2AQ9BY44 585 aaKnown RBP6.11□□□□□ -1.43
LINC00458-201ENST00000423442 WDR26Q9H7D7 661 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 CFAP45Q9UL16 551 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 VWA7Q9Y334 891 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 HES2Q9Y543 173 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 B3GALT1Q9Y5Z6 326 aa6.11□□□□□ -1.43
LINC00458-201ENST00000423442 CITO14578 2027 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 BAHCC1Q9P281 2608 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 C2orf78A6NCI8 922 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 HIDE1A8MVS5 230 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 SLC16A4O15374 487 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 FAM20BO75063 409 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 DDHD2O94830 711 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 URODP06132 367 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 MARCKSP29966 332 aaPredicted RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 SLC11A1P49279 550 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 AMPD3Q01432 767 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CREMQ03060 361 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 ELAVL2Q12926 359 aaKnown RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 GRIK3Q13003 919 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 HNRNPA0Q13151 305 aaKnown RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 SLC39A14Q15043 492 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 USP41Q3LFD5 358 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CATSPEREQ5SY80 951 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 HYIQ5T013 277 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CDCA2Q69YH5 1023 aaPredicted RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 PDXDC1Q6P996 788 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 KLHDC10Q6PID8 442 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CCDC73Q6ZRK6 1079 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 HAUS6Q7Z4H7 955 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 GPBP1Q86WP2 473 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CDR2LQ86X02 465 aaPredicted RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CEP57Q86XR8 500 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CALML6Q8TD86 181 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 RIN2Q8WYP3 895 aaPredicted RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 DLG3Q92796 817 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 NECTIN4Q96NY8 510 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 ACAP3Q96P50 834 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 RTP3Q9BQQ7 232 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 DHRS4Q9BTZ2 278 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 MMTAG2Q9BU76 263 aaKnown RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 PANK2Q9BZ23 570 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CCSER1Q9C0I3 900 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 SLC6A15Q9H2J7 730 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 NXF3Q9H4D5 531 aaKnown RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 SLC38A7Q9NVC3 462 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 SNTG2Q9NY99 539 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 DNAJB4Q9UDY4 337 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 RALYQ9UKM9 306 aaKnown RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 ODF2LQ9ULJ1 636 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 TNFSF13BQ9Y275 285 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 GDAQ9Y2T3 454 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 PRG3Q9Y2Y8 225 aaPredicted RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 ATP6V1DQ9Y5K8 247 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 SRPRBQ9Y5M8 271 aaKnown RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 CLIC4Q9Y696 253 aa6.1□□□□□ -1.43
LINC00458-201ENST00000423442 TPRP12270 2363 aaKnown RBP6.1□□□□□ -1.43
LINC00458-201ENST00000423442 MTCL1Q9Y4B5 1905 aaKnown RBP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 CHD6Q8TD26 2715 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 TMEM191CA6NGB0 347 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 SPTLC2O15270 562 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 TOM1L1O75674 476 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 RASGRP1O95267 797 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 CTSAP10619 480 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 MCF2P10911 925 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 SDHAP31040 664 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 STAT6P42226 847 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms